Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_016965.1 Length=2762 Score E Sequences producing significant alignments: (Bits) Value seq19028 331 2e-87 >seq19028 Length=31091 Score = 331 bits (366), Expect = 2e-87 Identities = 1008/1547 (65%), Gaps = 102/1547 (7%) Strand=Plus/Plus Query 964 GAATCATTCTGAGAATGCGTTAATGTTGTATATGGCATGTACTCATGCCTCTAACCCAGT 1023 || |||| |||| ||||| || ||||||||| | |||||||| ||||| || || Sbjct 13080 GACTCATACTGAAAATGCATT---GTTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1024 GTATGCTACTTTGAAGATACGGATCTATTTCTATGATTCTGTAACAAATTAATAAATATT 1083 ||| |||| ||| | ||| | ||||| ||||| |||| |||||||||||||||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1084 GAATTTTATTGAATAAGATTGGTCTACATATACAATATGTTCTAATACATCCCATAATAC 1143 |||||||||| || | ||| ||||| || | || || | ||||| ||||||| Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATAC 13256 Query 1144 ATGATCAACTGCACGAATTACATTATTAATACTGATAATTCCTAAATTATTTAAATATTT 1203 || || || || | ||| | ||| |||||||| |||| ||||| | |||| |||| Sbjct 13257 ATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTT 13316 Query 1204 AACAACCTGAGTCTTAAAGACCCTTAAGAATTGACCAGTCGGAGGCTGTGAAGTCATCCA 1263 | || || ||||| || |||||||| |||||||| || || ||| Sbjct 13317 CATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCT 13376 Query 1264 GATTCGGTAGACTAGAAAACACTTGTGCACTCCCAGAGCTTTCCGTAGGTTGTAGTTGAA 1323 ||| | || || ||| ||||| | ||| | |||| ||||||| |||||| Sbjct 13377 GATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAA 13436 Query 1324 CTGAATTTGGATTGTGATTATGTC--TTCTCTCATGAGAAATGGACGGTTCTGGTGGTCT 1381 ||||||| ||| ||||||||| || || || | ||| | | | ||||| Sbjct 13437 TCGAATTTGTATTTCGATTATGTCGGTTGTCGAATTTGT--TGGTCTGAGATTGTGGTTG 13494 Query 1382 ATTATCTTGAAATAAAGGGGATTTTGA-ATCTCCCAGATAT------------------- 1421 | ||||||||||| || | | || ||||| |||| Sbjct 13495 AGGATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGACT 13554 Query 1422 ACACGCCATTCTCTGCCTGAGCTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGATCG 1481 | ||||||||| || || ||||||||| ||||||||||||| |||||||| | Sbjct 13555 AGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGACCA 13614 Query 1482 TGACAGGCTAGTGCTATGAAATAT-GAACAACCACAAGGGAGATCAACACGACGACGTCT 1540 |||| ||| | | | ||||| ||||| |||||||| || || | || | | ||| Sbjct 13615 GAACAG-CTAATATTTTTGAATATTGAACATCCACAAGGCAGGTCTAGTCGTCTTCTTCT 13673 Query 1541 GTTC---CCCTTCTTG-------GCTA---ACCTG----TGCTGCACTT----------- 1572 | | | ||||||| | || | || |||| ||| Sbjct 13674 GATTTGTCTCTTCTTGATATCCGGATATGTAAATGAGGTTGCTTTCCTTGTATAATGTCT 13733 Query 1573 -TG-----ATTGGAA--------CCTGA--GTAGAGTGGGCCTTCGAGGGTGACGAAGAA 1616 || ||||| | |||| | | | ||| | || |||| ||| Sbjct 13734 ATGCATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTGTAGAATTC 13793 Query 1617 CGCATTCTTTAAAGACCAATTTTTTAGTGCTGTATTTTTCTGTTCATCCAAGAATTCTTT 1676 ||||| | |||||||||||||||| | ||||||| | || || | ||| ||||| Sbjct 13794 TGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTT 13853 Query 1677 ATAGCTAGAGTTGGGTCCTGGATTGCAGAGAAAGATAGTGGGAATTCCGCCTTTAATTTG 1736 |||||| || | || || |||||||| | ||||| || || || || || || || | Sbjct 13854 ATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTT 13913 Query 1737 AACTGGCTTTCCGTATTTTGTATTTGATTG-CCAGTCTCTTTGGGCCCCCATGAATTCTT 1795 || ||| ||||||||||| || | | | ||| | |||||||||||||| || |||| Sbjct 13914 TACAGGCCTTCCGTATTTTACCTT-GCTGGACCAATTGCTTTGGGCCCCCATAAACTCTT 13972 Query 1796 TAAAGTGCTTTAGATAGTGCGGATCTACGTCATCAATGACGTTGTACCAAGCATCATTAT 1855 |||||||||||||||| |||||||| |||| |||||||| ||| ||||| |||| ||| Sbjct 13973 TAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTG 14032 Query 1856 TGTAGACCTTAGGGCTAAGGTCTAGGTGACCACACAGATAATTATGTGGTCCCAACGATC 1915 || | ||| | | |||| ||||| || || |||||||||||||| || |||| Sbjct 14033 AATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATC 14092 Query 1916 TAGCCCACATGGTCTTACCCGTTCTACTATCACCTTCTATCACTATACTTATGGGTC-TT 1974 | |||||| ||||| || |||||| ||||| || || || ||||| |||||| || Sbjct 14093 TTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTT 14152 Query 1975 AACGGCCGCGCAGCGGCACTGACGACATTCTCGGCAGCCCACTCCTCAAGTTCTTCTGGA 2034 || ||||||||||||||| ||||| || || ||||| ||||| Sbjct 14153 AATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA----------- 14201 Query 2035 ACTTGATCAAAAGAAGAAGAAAGAAAAGGAGAAACATAAACCTCCATAGGAGGTGTAAAA 2094 ||| | || |||||| || ||||||| ||||||| || ||| || | || Sbjct 14202 --TTG-TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAAT 14258 Query 2095 ATCCTATCTAAATTTGAATTTAAATTATGATACTGTAATACATAATCCTTTG--GAGCTT 2152 || | |||||| |||| | || ||||||||| || |||| | | ||||| | || Sbjct 14259 ATTCGATCTAATTTTGGAACTATATTATGATATTGAAATAGAAA---CTTTGCTGGCATT 14315 Query 2153 TCTCCTTTAAT-ATATTGAGGGCCTCAGCTTTGGACCCTGAATTGATTGCCTCGGCATAT 2211 | | || |||| ||| || || || | | || | | | | || || ||| || Sbjct 14316 TTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGAT 14375 Query 2212 GCGTCGTTGGCAGATTGGCAACTCTCTCTAGCTGATCTTCCATCGACTTGGAAAACTCCA 2271 | || || | | || ||| ||||||| |||| |||||||| ||| ||| || Sbjct 14376 ACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCC 14435 Query 2272 TGATCAAGCACGTCTCCGTCTTTCTCCATGTAGGTTTTGACATCTGAAGAGCTCTTAGCT 2331 || || | ||||||| | ||||| | || ||||||||||| ||||| Sbjct 14436 CAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCG 14495 Query 2332 CCCTGAATGTTCGGATGGAAATGTGCTGACCTGGT-TGGGGATG--TGAGGTCGAAGAAT 2388 || | ||| || ||| ||||| || || || | ||||| ||| |||||| | Sbjct 14496 GATTGGAAGTTTGGGTGG-TATGTGGTG--CTAGTATTAGGATGGATGATATCGAAGTGT 14552 Query 2389 CTATTGTTTCTGCACTGGAATTTACCTTCGAATTGGATGAGCACATG 2435 ||| |||||| | || || ||||||||||| || || |||| Sbjct 14553 CTAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGGGCATG 14599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8726458211504