Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_016999.1 Length=2660 Score E Sequences producing significant alignments: (Bits) Value seq19028 125 1e-25 >seq19028 Length=31091 Score = 125 bits (138), Expect = 1e-25 Identities = 242/351 (69%), Gaps = 11/351 (3%) Strand=Plus/Plus Query 1520 TTTTCTTCTTTGTCGAGGAACGATTTATAGCTGGCGCCCTCGCCAGGATTGCA-AAGCAC 1578 |||| ||| | ||||||||| ||||||||||| ||||||||||| ||| | Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1579 AATGCATGGGATTCCACCTTTAATTTGAACTGGCTTCCCGTATTTGCAATTTGATTG-CC 1637 | || || || ||||| || || | || ||| | |||||||| | ||| | | || Sbjct 13888 ATTG-TCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTT-TACCTTGCTGGACC 13945 Query 1638 AGTCCTTTTGAGCACCTATCAATTCTTTCCAGTGCTTTAACTTTAGATATTGCGGTGCGA 1697 | | |||| || || || || ||||| |||| ||||||||| ||||| ||| Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTG------CTTTAGATAATGCGGATCGA 13999 Query 1698 TGTCATCTATCACGTTGTACTGCACATCATTTGAATAGACCTTTGAATTGAAATCGAGGT 1757 || ||| || | ||| ||| ||| ||||||||| | || ||| ||||| | | Sbjct 14000 CGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAAT 14059 Query 1758 GACCACTCAAGTAATTATGGGACCCCAATGCACGTGCCCACATGGTCTTGCCCGTTCGAG 1817 |||| | | ||||||||| | || || | | ||||||| ||||| || |||| || Sbjct 14060 GACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAG 14119 Query 1818 AGTCACCCTCGATGATTATACTAATTGGTC-TCTCCGGCCGCGCAGCGGCA 1867 | |||||||| |||| ||||| | |||| | ||||||||||||||| Sbjct 14120 ACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCA 14170 Score = 93.3 bits (102), Expect = 7e-16 Identities = 402/630 (64%), Gaps = 63/630 (10%) Strand=Plus/Plus Query 848 GAATCATACGGAGAACGCTTTACTATTGTATATGGCATGTACTCATGCCTCTAACCCCGT 907 || |||||| || || || || |||||||| | |||||||| ||||| || || Sbjct 13080 GACTCATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 908 GTATGCAACCTTAAAAATTCGGATCTATTTTTATGATTCGATAACCAATTAATAAAATTT 967 ||| || | | || || | ||||||||||| || | |||||||||| || Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 968 GAATTTTATTTCATGATTCTCAAGTACATA------------ATTTACATATGATTTGTC 1015 ||||||||||||||||| |||||||||| | |||||| ||| | | Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACAT-TGAATAATA 13255 Query 1016 TGTTGCAAATCGAACAGCTCTGATTACATTGTTAAGCGATACAACACCTATTCGTCCTAA 1075 ||| || | ||||||| || | |||||||| | |||||||| ||| |||| Sbjct 13256 CATTG----TCTA-CAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAA 13310 Query 1076 GTACAACATGACTAAGTATTTAAA----CCTAACTAAA--TATGTCGTCCCAGAAGCTCT 1129 | ||| || ||||||| | ||| ||| ||||||| || | | Sbjct 13311 AAATTTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCG-----GAGGACGT 13365 Query 1130 CAGGGATATCGTCCAGACTTGGAAATTGAGATATGCCTTGTGGAGAGCCAATGCTCTCCT 1189 | || |||| || | ||| ||||| | || ||||| ||| || | | |||| Sbjct 13366 AAACGA----GTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCT 13421 Query 1190 GAGGTTGTGGTTGAACCTGATCTGGACGT-GATATATTCTGGTTGTCGTGTATAGTGGAT 1248 |||||||||||||| | || || | | ||| ||| |||||||| | | ||| | Sbjct 13422 CAGGTTGTGGTTGAATCGAATTTGTATTTCGAT-TATGTCGGTTGTCGAATTTGTTGG-T 13479 Query 1249 CCTCCACC-TGTTTGA---TCTTGAAATAAAGGGG-ATTTGATATCTCCCAGATAT---- 1299 | | || |||| |||||||||| || | | |||| ||||| |||| Sbjct 13480 CTGAGATTGTGGTTGAGGATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGG 13539 Query 1300 ---------------AAACGCCACTCTCTGCCTGATGTGCAGTGATGAGTTCCCCTGTGC 1344 | |||||| || || || || ||||||||| ||||||||||| Sbjct 13540 TTGACGTAAACGACTAGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGC 13599 Query 1345 GTGAATCCATGTCCTCTGCAGTTGATATGGACGTATATGGAGCACCCGCAATCTATGTCA 1404 || ||||||| || ||| | |||| | |||| || || || ||| | ||| Sbjct 13600 GTATATCCATGACCAGAACAGCTAATATTTTTGAATATTGAACATCCACAAGGCAGGTCT 13659 Query 1405 ATTCGTCTTCTTCTGATTGCTCTCTTCTTG 1434 | |||||||||||||||| |||||||||| Sbjct 13660 AGTCGTCTTCTTCTGATTTGTCTCTTCTTG 13689 Score = 84.2 bits (92), Expect = 4e-13 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 2070 CATTTAACGCCTTTGCATATGTATCGTTAACTGTCTGTTGACCTCCTCGAGCAGATCGTC 2129 || ||||||| | |||| || ||| || ||| ||| |||||||| ||||||||||| Sbjct 14356 CACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTC 14415 Query 2130 CGTCGATCTGAAAATCACCCCATTCGACGTAATCTCCGTCCTTCTCAATATATGATTTGG 2189 | ||||| ||||||| ||||| ||| |||||| | ||| ||| | || ||| || Sbjct 14416 CATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAA 14475 Query 2190 CGTCGGAGGATGACTT 2205 | || || ||||| || Sbjct 14476 CATCTGAAGATGATTT 14491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8400175683068