Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_017001.1 Length=2620 Score E Sequences producing significant alignments: (Bits) Value seq19028 120 5e-24 >seq19028 Length=31091 Score = 120 bits (132), Expect = 5e-24 Identities = 242/355 (68%), Gaps = 12/355 (3%) Strand=Plus/Plus Query 1510 TTTTCCTCTTTGTCGAGGAAAGATTTATAACTGGCCCCCTCGCCAGGATTGCAAAGCACG 1569 |||||||| | ||||||| |||||| |||| ||||||||||| | | | Sbjct 13831 TTTTCCTCCT---CGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1570 ATGCATGGGATACCACCTTTAATTTGAACTGGCTTACCGTATTTGCAGTTTGATTG-CCA 1628 || || || ||||| || || | || ||| | |||||||| | ||| | | ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTGCTGGACCA 13946 Query 1629 GTCCCTTTGGGCCCCGATAAGTTCTTTCCAGTGCTTTAACTTTAGATAGTGCGGTGCGAC 1688 | ||||||||||| |||| ||||| |||| ||||||||| ||||| |||| Sbjct 13947 ATTGCTTTGGGCCCCCATAAACTCTTTAAAGTG------CTTTAGATAATGCGGATCGAC 14000 Query 1689 ATCATCAATTACGTTATACTGCACATCGTTTGAGTAGACCCTTGAATTGAAATCGAGGTG 1748 | |||||| | ||||||| ||| ||||| || | | ||| ||||| | || Sbjct 14001 GTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATG 14060 Query 1749 ACCACTCAAGTAATTGTGGGACCCTAATGTACGAGCCCACATGGTCTTGCCGGTTCTTGA 1808 ||| | | |||||| || | ||||| | | |||||| ||||| || ||||| || Sbjct 14061 ACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGA 14120 Query 1809 ATCACCCTCGATTATTATACTGATAGG-CCTCTCCGGCCGCGCAGCGGCATCCCT 1862 |||||||| || | ||||| | || | | |||||||||||||||||||| Sbjct 14121 CTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCT 14175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8272221750348