Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_017987.1 Length=2751 Score E Sequences producing significant alignments: (Bits) Value seq19028 242 6e-61 >seq19028 Length=31091 Score = 242 bits (268), Expect = 6e-61 Identities = 296/400 (74%), Gaps = 3/400 (1%) Strand=Plus/Plus Query 1613 GCATTTTTTAAAGCCCAATTTTTGAGTGCGGAGTTCTTTTCCTCATCCAAGTACTCTTTA 1672 ||||| | |||| ||||||||| | | || |||||||| || | | |||||||| Sbjct 13795 GCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTA 13854 Query 1673 TAGCTGGAATTTGGTCCTGGATTGCAGAGGAAGATTGTTGGTATCCCGCCTTTAATTTGA 1732 ||||||||| | || || |||||||| | ||||||||| |||||||| || || || | Sbjct 13855 TAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTT 13914 Query 1733 ACTGGCTTCCCGTACTTTGTGTTTGATTG-CCAGTCCCTTTGGGCACCCATGAACTCCTT 1791 || ||| | ||||| ||| || | | | ||| | |||||||| ||||| ||||| || Sbjct 13915 ACAGGCCTTCCGTATTTTACCTT-GCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTT 13973 Query 1792 AAAGTGCTTTAGGTAATGCGGGTCTACGTCATCAATGACGTTATACCACGCCTCATTACT 1851 |||||||||||| |||||||| || |||| |||||||| ||||||||| || | ||| Sbjct 13974 AAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGA 14033 Query 1852 GTATATCTTTGGACTCAGATCCAGGTGTCCACATAAATAGTTATGTGGTCCTAATGATCT 1911 || || || | ||| ||| | || || |||| || |||||||||||||| ||||| Sbjct 14034 ATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCT 14093 Query 1912 GGCCCACATTGTTTTACCTGTGCGACTATCTCCCTCTATCACTATACTGAGAGGTC-TCA 1970 |||||| ||| || ||||| | | || ||||| || || ||||| |||| | | Sbjct 14094 TGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTA 14153 Query 1971 AAGGCCGCGCAGCGGCAGCCACCACGTTCTCCGCCGCCCA 2010 | ||||||||||||||| || || || || || ||||| Sbjct 14154 ATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCA 14193 Score = 141 bits (156), Expect = 2e-30 Identities = 254/362 (70%), Gaps = 13/362 (4%) Strand=Plus/Plus Query 959 TCATACTGAGAATGCGTTGTTGTTGTATATGGCATGTACTCATGCCAGTAACCCTGTGTA 1018 ||||||||| ||||| ||||||| |||| | |||||||| ||| ||||| || Sbjct 13083 TCATACTGAAAATGCATTGTTGT---ATATTAGTTCAACTCATGCATCTAATCCTGTATA 13139 Query 1019 TGCTACTTTGAAAATCAGGATCTACTTCTATGATTCTGT-TCAGAATTAATAAAGTTTGA 1077 | |||| ||| || | | || || ||||| ||| ||| |||||||||| |||| Sbjct 13140 TTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCA-AATTAATAAATATTGA 13198 Query 1078 ATTTTATT--AT-ATATGAAAACTGGGCCTCAATAGTGCCTTCGAGTTTATCCCACAATA 1134 |||||||| || |||| || | | || | || || | | || | |||| Sbjct 13199 ATTTTATTTCATGATATTCAA---GTACATCCACTGTTTGCTCAATTACATTGAATAATA 13255 Query 1135 CATGATTAATTGCTCTAATTACATTATTAATACTAATCACTCCCAATCGGTCTAGATATT 1194 ||| | | |||||||| | ||| ||||||||||| || || |||||||||| | ||| Sbjct 13256 CATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATT 13315 Query 1195 TCA-TACATTGGTATTTAAATACTCTTAAGAAACGCCAGGTCTGAGGATGTAAACGAGTC 1253 ||| |||| | |||||||||||||||||||| | ||| ||||| ||||||||||| Sbjct 13316 TCATTACA-CGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTC 13374 Query 1254 CAGATTCGGCAGATTAGAAAACATTTGTGTATCCCCAACGCTTTCCTCAGGTTGTAATTG 1313 | ||| | || | || ||| |||||| | || | ||||||||||||| ||| Sbjct 13375 CTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTG 13434 Query 1314 AA 1315 || Sbjct 13435 AA 13436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8691270880006