Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_018090.1 Length=2741 Score E Sequences producing significant alignments: (Bits) Value seq19028 239 8e-60 >seq19028 Length=31091 Score = 239 bits (264), Expect = 8e-60 Identities = 263/346 (76%), Gaps = 3/346 (1%) Strand=Plus/Plus Query 1635 TTCTTTTCCTCTTCTAGGTACTCTTTATAACTTGAATTGGGCCCTGGATTGCAGAGGAAG 1694 || |||||||| || ||| |||||||||| || ||| | || || |||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1695 ATTGTTGGGATGCCGCCTTTAATTTGAACTGGCTTTCCGTACTTTGTGTTTGATTG-CCA 1753 ||||| || || || || || || | || ||| ||||||| ||| || | | | ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTT-GCTGGACCA 13946 Query 1754 GTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGATAGTGCGGGTCTACGTCATC 1813 | |||||||||||||| || |||||||||||||||||||| ||||| || |||| ||| Sbjct 13947 ATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATC 14006 Query 1814 AATGACGTTGTACCACGCTTCGTTATTGTACACTTTCGGACTCAGATCTAAATGGCCACA 1873 ||||| ||| ||||| || | || || | ||| | ||| ||||||||| || || Sbjct 14007 AATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCA 14066 Query 1874 TAAGTAATTATGTGGACCCAACGACCTGGCCCACATTGTCTTCCCCGTCCGACTATCACC 1933 || |||||||||||| || || || || |||||| ||||||||| || | | ||||| Sbjct 14067 TAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACC 14126 Query 1934 TTCAACTACTATACTCACCGGTC-TCAAGGGCCGCGCAGCGGCATC 1978 |||| || |||||| |||| | || ||||||||||||||||| Sbjct 14127 CTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATC 14172 Score = 143 bits (158), Expect = 5e-31 Identities = 255/364 (70%), Gaps = 11/364 (3%) Strand=Plus/Plus Query 948 GAATCATAGTGAGAATGCTTTGATGTTGTATATGGCATGTACTCATGCCTCTAACCCCGT 1007 || ||||| ||| ||||| ||| |||||||| | |||||||| ||||| || || Sbjct 13080 GACTCATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1008 GTATGCTACTCTAAAGATACGGATCTATTTCTACGATTCGGTCACAAATTAATAAAGATT 1067 ||| |||| | | | ||| | ||||| || || || |||||||||||| ||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1068 TAATTTTATTATCATTGAATTGTC-TACATAAACTGTTTGTGTCAAT-ACATTCCATAAA 1125 ||||||||| |||| ||| ||||| |||||||| ||||| ||||| |||| Sbjct 13197 GAATTTTATT-TCATGATATTCAAGTACATCCACTGTTTGC-TCAATTACATTGAATAAT 13254 Query 1126 ACATGATTCACAGCTCTAATTACATTGTTGATACTAATTACACCCAAACTATCAAGATAT 1185 |||| | ||||||||||| | |||||| |||||||| ||||| || | || | | || Sbjct 13255 ACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAAT 13314 Query 1186 TTCAACACTTGTGTTCTAAATACCCTTAAGAAACGACCAA--TCTGAAGGTGTGAGTTCG 1243 |||| || | | ||||||| ||||||||| || | || || | || | | Sbjct 13315 TTCATTACACGAAATTTAAATACTCTTAAGAAA--ACGTATGTCGGAGGACGTAAACGAG 13372 Query 1244 TCCAGATGCGGAAGGTTAGGAAACATTGGTGAATCCCCAATGCTTTCCTCAGGTTGTAGT 1303 ||| ||| |||| | |||||| || ||||| || | | ||||||||||||| || Sbjct 13373 TCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGT 13432 Query 1304 TGAA 1307 |||| Sbjct 13433 TGAA 13436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8659282396826