Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_018457.1 Length=2623 Score E Sequences producing significant alignments: (Bits) Value seq19028 109 9e-21 >seq19028 Length=31091 Score = 109 bits (120), Expect = 9e-21 Identities = 239/351 (68%), Gaps = 14/351 (4%) Strand=Plus/Plus Query 1515 TTTTCCTCTTTGTCGAGGAAAGATTTATAGCTGGAGCCCTCGCCAGGATTGCA-AAGTAT 1573 |||||||| | ||||||| |||||||||||| ||||||||||| ||| | Sbjct 13831 TTTTCCTCCT---CGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1574 AATGCAAGGAACCCCTCCTTTAATTTGAACTGGCTTTCCGTATTTGCAGTTTGATTG-CC 1632 | || || | ||| || || || | || ||| |||||||||| | ||| | | || Sbjct 13888 ATTG-TCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTT-TACCTTGCTGGACC 13945 Query 1633 AGTCTTTTTGAGCACCTATCAATTCCTTCCAATGCTTTAACTTTAGATATTGCGGTGCGA 1692 | | |||| || || || || || || | || ||||||||| ||||| ||| Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTG------CTTTAGATAATGCGGATCGA 13999 Query 1693 TGTCATCTATTACGTTGTACTGCACATCATTTGAATAGACCCGCGAATTGAAATCGAGGT 1752 || ||| || | ||| ||| ||| ||||||||| | ||| ||||| | | Sbjct 14000 CGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAAT 14059 Query 1753 GACCGGACAAGTAGTTATGGGACCCTAGCGCACGTGCCCACATGGTCTTCCCCGTTCGAG 1812 ||||| | | ||| ||||| | |||| | | ||||||| |||||||| |||| || Sbjct 14060 GACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAG 14119 Query 1813 AGTCACCCTCGATTATTATACTAATAGGTC-TTTCCGGCCGCGCAGCGGCA 1862 | |||||||| || | ||||| | |||| || ||||||||||||||| Sbjct 14120 ACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCA 14170 Score = 98.7 bits (108), Expect = 2e-17 Identities = 392/616 (64%), Gaps = 61/616 (10%) Strand=Plus/Plus Query 843 GAATCATACGGAAAACGCATTATTATTGTACATGGCATGTACTCATGCCTCTAACCCCGT 902 || |||||| ||||| ||||| || ||| || | |||||||| ||||| || || Sbjct 13080 GACTCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 903 GTATGCAACTCTAAAAATTCGGATCTATTTTTATGATTCGATAACCAATTAATAAAATTT 962 ||| ||| | | || || | ||||||||||| || | |||||||||| || Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 963 GAATTTTATTACATGATTCTCAAGTACA------------TAATTTACATATGATTTGTC 1010 |||||||||| |||||| ||||||||| | | |||||| ||| | | Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACAT-TGAATAATA 13255 Query 1011 TGTTGCGAAACGAACAGCTCTTATTACATTGTTAAGCGAGATAACACCTACTCGCTCTAA 1070 ||| |||||||| || | |||||||| |||||||||| ||| ||||| Sbjct 13256 CATTG-----TCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAA 13310 Query 1071 GTACAGCATGACTAGGAATTTAAAT-CTATTTAAA-----TATGTCGTCCCAGAAGCTCT 1124 | ||| || | ||||||||| || || | | ||||||| || | | Sbjct 13311 AAATTTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCG-----GAGGACGT 13365 Query 1125 CAGGGATATCGTCCAGACTTGGAAATTGAGATATGCCTTGTGGAGAGCCAATGCTCTCCT 1184 | || |||| || | ||| ||||| | || ||||| ||| || | | |||| Sbjct 13366 AAACGA----GTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCT 13421 Query 1185 CAGGTTGTGGTTGAACCTGATCTGGACGTGGTATATTCTGGTCGTTGTGTGTAGTGGATC 1244 ||||||||||||||| | || || | | | ||| ||| || | | | || | || Sbjct 13422 CAGGTTGTGGTTGAATCGAATTTGTATTTCGATTATGTCGGTTGTCGAAT-TTGTTGGTC 13480 Query 1245 CTCTA-CGTGGTT---CATCTTGAAATAGAG-GGGATTTGATATCTCCCAGATA------ 1293 | |||||| ||||||||||| || | | |||| ||||| ||| Sbjct 13481 TGAGATTGTGGTTGAGGATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGT 13540 Query 1294 -------------TAGACGCCATTCTCTGCCTGACGTGCAGTGATGAGTTCCCCTGTGCG 1340 |||||||||||| || || | ||||||||| |||||||||||| Sbjct 13541 TGACGTAAACGACTAGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCG 13600 Query 1341 TGAATCCATGTCCTGCGCAGTTAAGATGGACGTATATGGAGCACCCGCAATCTATATCAA 1400 | ||||||| || | ||| ||| || | |||| || || || ||| | || | Sbjct 13601 TATATCCATGACCAGAACAGCTAATATTTTTGAATATTGAACATCCACAAGGCAGGTCTA 13660 Query 1401 TTCGTCTTCTCCTGAT 1416 ||||||||| ||||| Sbjct 13661 GTCGTCTTCTTCTGAT 13676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8281818295302