Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_019569.1 Length=2647 Score E Sequences producing significant alignments: (Bits) Value seq19028 114 2e-22 >seq19028 Length=31091 Score = 114 bits (126), Expect = 2e-22 Identities = 238/349 (68%), Gaps = 14/349 (4%) Strand=Plus/Plus Query 1534 TTTTCCTCTTTGTCTAGGAAGTCTTTATAGCTGGCCCCCTCTCCAGGATTGCATAGCACG 1593 |||||||| | | ||||| ||||||||||||| ||||||||||| | | | Sbjct 13831 TTTTCCTCCTCG---AGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1594 ATTGAAGGGACCCCACCTTCAATCACTCTTGGCTTTCCGTATTTACAGTTTGACTG--CC 1651 |||| || | |||||| | ||| | ||| |||||||||| | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACC 13945 Query 1652 ACTTCTTTTGAGAGCCAATCAGTTCTTTCCAGTGTTTCAACTTTAGGTAATGCGGTGGTA 1711 | || |||| | || || | ||||| |||| |||||| |||||||| | Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTG------CTTTAGATAATGCGGATCGA 13999 Query 1712 CGTCATCAATGACGTTATACTCCACTTCGTCTGAGTAGACCTTTGAGTTGAAATCCAGGT 1771 ||| |||||||| ||||||| | | | ||| || | || || ||||| | | Sbjct 14000 CGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAAT 14059 Query 1772 GTCCACTTAGGTAATTGTGTGGGCCTAAGGCACGAGCCCACATCGTCTTCCCTGTCCTTG 1831 | || | ||||||||| ||||| ||||| | | |||||| ||||||||||| || | Sbjct 14060 GACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAG 14119 Query 1832 AATCACCTTCAACGATGATACTAAGTGGTCTCTCA-GGCCGCGCAGCGG 1879 | ||||| |||| || ||||| |||| | | ||||||||||||| Sbjct 14120 ACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGG 14168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8358590654934