Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_019946.1 Length=2574 Score E Sequences producing significant alignments: (Bits) Value seq19028 172 9e-40 >seq19028 Length=31091 Score = 172 bits (190), Expect = 9e-40 Identities = 277/393 (70%), Gaps = 15/393 (4%) Strand=Plus/Plus Query 1436 GAATTTAGCATTTTTGAGAGTCCACTGTTTTAGTGACGCATTTTCCTCTTTGTCGAGGAA 1495 ||||| ||||| | | || ||| | ||||| | ||||| || | |||||||| Sbjct 13788 GAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAA 13847 Query 1496 ATCTTTATAGCTCCCCCCGTCTCCTGGATTGCACAGCACGATTGATGGTATGCCCCCTTT 1555 ||||||||||| || |||||||||| | ||||| ||||| || || || Sbjct 13848 CTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTT 13907 Query 1556 AATTTGAACTGGCTTGCCGTACTTACAGTTGGACTG--CCAATCTTTCTGGGCCCCAATC 1613 || | || ||| | ||||| || ||| ||| ||||| | |||||||| || Sbjct 13908 TATCTTTACAGGCCTTCCGTATTTTACCTTG--CTGGACCAATTGCTTTGGGCCCCCATA 13965 Query 1614 AACTCTTTCCAGTGCTTTAACTTTAAGTAGTGCGGTGCGACGTCATCGATGACGTTATAT 1673 |||||||| ||||||||| | | ||||| |||||| ||| |||| |||||| Sbjct 13966 AACTCTTTAAAGTGCTTTAGAT------AATGCGGATCGACGTTATCAATGATGTTATA- 14018 Query 1674 TCCA--CTTCGTTCGAGTAAACCCTAGAATTGAAATCTAAATGACCACTCAAGTAATTAT 1731 ||| | | || || |||| || ||| |||||||||||||| | | |||||||| Sbjct 14019 -CCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTAT 14077 Query 1732 GTGGGCCTAAAGAACGAGCCCACATTGTCTTCCCTGTTCTTGAATCACCCTCGACGATGA 1791 |||| |||||||| | |||||| ||||||||||||||| || |||||||| | || | Sbjct 14078 GTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAA 14137 Query 1792 TACTAATAGGTC-TTTCCGGCCGCGCAGCGGCA 1823 |||| | |||| || ||||||||||||||| Sbjct 14138 TACTCTTGGGTCGTTAATGGCCGCGCAGCGGCA 14170 Score = 136 bits (150), Expect = 6e-29 Identities = 264/381 (69%), Gaps = 24/381 (6%) Strand=Plus/Plus Query 804 GAATCACACTGAGAATGCTTTGTTATTGTACATGGCATGTACTCATGCCTCTAATCCTGT 863 || ||| ||||| ||||| ||||| ||| || | |||||||| ||||||||||| Sbjct 13080 GACTCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 864 GTATGCAACATTAAAAATTCGGATCTATTTTTATGATTCGATAACAAATTAATAAAGATT 923 ||| || | | || || | ||||||||||| || |||||||||||| ||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 924 TACTTTTATTTCATGATTCTCAAGTACA-----TGATT-TACATATGCCTTGTCTGTTGC 977 | |||||||||||||| ||||||||| || || || | | ||| | | | Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATAC 13256 Query 978 GAAACGAACAGCTCTAATTACATTGTTAATCCCAATAACACCTATTCTATCTAAA---TA 1034 ||||||||||| | ||||||||| | ||||||||||| || |||||| | Sbjct 13257 ATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTT 13316 Query 1035 CAGTAAAACTAAATACTTAAATCTATTTAAGTAA--GTCT-TCCCAGAAGCTCGAATTGA 1091 || | | || |||| |||||| ||||| || || | || || | | || || Sbjct 13317 CA-TTACACGAAAT--TTAAATACTCTTAAGAAAACGTATGTCGGAGGACGT--AAACGA 13371 Query 1092 TGTCGTCCAGACTTGGAAGTTCAGAAAAGCTTTGTGAAGATTCAGTGCCCTCCTGAGGTT 1151 |||| || | |||||| || ||||||||||||||||||||| || |||| ||||| Sbjct 13372 ----GTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTT 13427 Query 1152 GTGGTTGCACCTGATTTGAAT 1172 ||||||| | | ||||| || Sbjct 13428 GTGGTTGAATCGAATTTGTAT 13448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8125074727720