Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_020236.1 Length=2748 Score E Sequences producing significant alignments: (Bits) Value seq19028 419 4e-114 >seq19028 Length=31091 Score = 419 bits (464), Expect = 4e-114 Identities = 739/1067 (69%), Gaps = 32/1067 (3%) Strand=Plus/Plus Query 1602 GCATTCTTTAGAGCCCAATTCTTTAGTGCGGTGTTCTTTTCCTCGTCGAGGAATTCTTTA 1661 ||||| | | || |||||| |||| | | || |||||||| |||||||| |||||| Sbjct 13795 GCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTA 13854 Query 1662 TAACTGCTGTTGGGACCAGGATTGCAGAGGAAGATTGTCGGTATCCCGCCTTTAATTTGA 1721 || ||| | |||||||||||||| | |||||||||||||||||| || || || | Sbjct 13855 TAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTT 13914 Query 1722 ACTGGCTTCCCGTATTTAGTGTTTGATTG-CCAGTCCCTTTGGGCCCCCATGAACTCTTT 1780 || ||| | |||||||| || | | | ||| | |||||||||||||| |||||||| Sbjct 13915 ACAGGCCTTCCGTATTTTACCTT-GCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTT 13973 Query 1781 AAAGTGCTTGAGGAAGTGCGGGTCGACGTCATCAATGACGTTGAACCAAGCATCATTACT 1840 ||||||||| || | ||||| ||||||| |||||||| ||| |||| |||| ||| | Sbjct 13974 AAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATT--T 14031 Query 1841 GTATACCTTT--GGACTCAGATCTAAATGACCACACAGATAGTTGTGTGGGCCTAGTGAC 1898 | ||| ||| | ||| |||||||||||| || || || || ||||| |||| || Sbjct 14032 GAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGAT 14091 Query 1899 CTAGCCCACATCGTCTTCCCGGTTCTACTATCTCCCTCAATGACTATACTTTGAGGTC-T 1957 || |||||| |||||||| |||||| || ||||||||||| ||||| | |||| | Sbjct 14092 CTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGT 14151 Query 1958 TAAAGGCCGCGCAGCGGCATTGACGACGTTATGGGCCGCCCATTCATCAAGTTCTTCTGG 2017 ||| |||||||||||||||| || || | || ||||| |||| | | || Sbjct 14152 TAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAATTGTTGAAGG 14211 Query 2018 AACTTGGTC-AAAAGNNNNNNNNNNNNNNNNNNAAATATATTCCTCCATTGGAGGAGTAA 2076 || | ||||| || ||| || || || | | Sbjct 14212 AAGAACAACTAAAAGGACT---------------AACATAAGGTTCAGGAGGGGGCATGA 14256 Query 2077 AAATCCTATCTAAATTAGATTTTAAATTATGATACTGAAAAATATAATCTTT--CGGGAG 2134 | || | |||||| || | || ||||||||| || ||||| || |||| || | Sbjct 14257 ATATTCGATCTAATTTTGGAACTATATTATGATATTG--AAATAGAAACTTTGCTGGCAT 14314 Query 2135 TTTCTCCCGAATGACAGCCATAGCGGCTTCAACGGAGCCTGTGTTTAGGGCCTCTGCAGC 2194 ||| || | ||| | || | || |||||| || | ||| || ||||||| Sbjct 14315 TTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGA 14374 Query 2195 AGCATCATTAGCTGTCTGTTGACCTCCTCGTGCAGATCTTCCATCGATCTGAAAACTACC 2254 ||||||| | ||| ||| |||||||| ||||||| ||||||||| |||||| | || Sbjct 14375 TACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCC 14434 Query 2255 CCAGTTGATGTAATCACCGTCCTTTTTGATGTAGGACTTGACGTCCGAGCTGGACTTAGC 2314 ||||| | ||||||||| ||| || |||||| ||| || || || || ||||| Sbjct 14435 CCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGC 14494 Query 2315 TCCCTGGAAGTTTGGGTGGTATTGGGTGGAGGTATTAGGGTGTGTGATGTCGAAATGTCT 2374 |||||||||||||||||| |||| |||||||| || |||| ||||| ||||| Sbjct 14495 GGATTGGAAGTTTGGGTGGTATGTGGTGCTAGTATTAGGATGGATGATATCGAAGTGTCT 14554 Query 2375 GGGATTACGGAACTGGGCTTTACCTTTGAATTGGATGAGCACATGGAGATGCAGTGACCC 2434 || || | || || || || |||| |||||| || || ||||| ||| | | ||| Sbjct 14555 AGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGGGCATGGCTATGAAATTCCCC 14614 Query 2435 ATTCTTATGTTTTTCTTGTGCTACTCGTATGAATAATTTATCGGATGGGCATGCTATTTG 2494 || || ||||||||||| |||| || || | ||||| || || || | | || Sbjct 14615 ATCCTGGTGTTTTTCTTGACAGACTC-TA-AAACAGTTTATTTGAAGGACAAGAAACCTG 14672 Query 2495 TTGGATAAGTTCTAGGGCTTGCTCTTTCGGAATGGGACATTTGGGATAAGTGAGAAAGAT 2554 || | | |||| | ||| ||||| |||| |||||||| ||| | || ||||| || Sbjct 14673 TTTCAAGTGCTCTAAGATTTGATCTTTAGGAAGAGGACATTTTGGAAATGTAAGAAATAT 14732 Query 2555 ATTTTTTGCTTTCACTTGGAATGAATTAAGACGAGGCATTTTGACCGAGTGAATTGGGTG 2614 ||||| | || || |||||||||| ||| | ||||||||| | |||| ||||| Sbjct 14733 GTTTTTAGAATTTACCTGGAATGAATGAAGCCTTGGCATTTTGTAGAAATGAAATGGGT- 14791 Query 2615 CTCTCCAAAGTTCTATAGAATGGGGGGCTTTGGGTGCCTATTTATAC 2661 |||| | | |||| | || ||| |||||||| ||| | ||||| Sbjct 14792 -ACTCCGACTTCCTAT-GCATTGGGTGCTTTGGGAGCCCTTATATAC 14836 Score = 134 bits (148), Expect = 2e-28 Identities = 297/437 (68%), Gaps = 15/437 (3%) Strand=Plus/Plus Query 952 CATACTGAAAATGCTTTGTTATTGTATATGGCATGTACCCATGCCTCTAATCCCGTGTAT 1011 |||||||||||||| ||||| |||||| | || ||||| |||||||| || ||| Sbjct 13084 CATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1012 GCTACTTTGAAAGTCAGGAGTTATTTCTATGACTCAGTGACGAATTAATAAATATTAAAT 1071 |||| ||| | | |||||||| ||||| || | |||||||||||||| ||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 1072 TTTATTTC-TGA-ATCCATGTCTACATACATAGTTTGTTCTAtttttttCCATAATACAT 1129 |||||||| ||| || || | ||||| || ||||| || ||| || ||||||||| Sbjct 13201 TTTATTTCATGATATTCAAG--TACATCCACTGTTTGCTCAATTACATTGAATAATACAT 13258 Query 1130 GATTTACAGCTCTAATAATTGAGTTAATTGAAATTACACCTAGATTGTTTAGATACTTGA 1189 | ||||||||||||||| |||||| ||| ||||||| || || | | || | Sbjct 13259 TGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCA 13318 Query 1190 GGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAATCTGAGGGTGTAAGGTCGTCCAGA 1249 || | ||| ||||| |||||||||| || |||| |||| |||| || Sbjct 13319 TTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGA 13378 Query 1250 TTCGGTATGTCAGAAAACACTTGTGCACTCCCAGAGCTCTCCGAAGGTTGTAGTTGAATT 1309 | | | | || ||| ||||| | ||| | ||| ||||||| ||||||| Sbjct 13379 TCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATC 13438 Query 1310 GGATCCTTATTGTTATGATGTCCATGTTCATCGTGAATGGACGGT-TGA---CGTGGTTG 1365 | || |||| || ||||| | | ||| | | | ||| ||| ||||||| Sbjct 13439 GAATTTGTATTTCGATTATGTC---GGTTGTCG-AATTTGTTGGTCTGAGATTGTGGTTG 13494 Query 1366 AGGATCTTGAAATAAAG 1382 |||||||||||||| || Sbjct 13495 AGGATCTTGAAATATAG 13511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8681674335052