Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_020253.1 Length=2676 Score E Sequences producing significant alignments: (Bits) Value seq19028 176 8e-41 >seq19028 Length=31091 Score = 176 bits (194), Expect = 8e-41 Identities = 441/656 (67%), Gaps = 38/656 (6%) Strand=Plus/Plus Query 1612 CCTGGATTGCAGAGCACGATTGATGGTATCCCACCTTTAATTTTGAACTGGCTTTTCCGT 1671 || |||||||| | | ||||| ||||||||||| || || || | | ||| || |||| Sbjct 13870 CCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTA-CAGGCCTT-CCGT 13927 Query 1672 ACTTGCAATTTGACTG--CCAGTCTTTTTGAGCACCAATCAACTCCTTCCAGTGCTTTAA 1729 | || | ||| ||| ||| | |||| || || || ||||| || ||||||||| Sbjct 13928 ATTTT-ACCTTG-CTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTA- 13984 Query 1730 CTTTAGATATTGCGGGTTGACGTCATCAATGACGTTGTATTCCA--CTTCGTTCGAGTAA 1787 |||| ||||| | ||||| |||||||| ||| || ||| | | || || ||| Sbjct 13985 -----GATAATGCGGATCGACGTTATCAATGATGTTATA--CCAGGCATTATTTGAATAA 14037 Query 1788 ACCCTAGAATTGAAGTCGAGATGACCACTCAAGTAATTATGTGGGCCTAACGCACGAGCC 1847 | || ||| || || | |||||| | | |||||||||||| ||||| | | ||| Sbjct 14038 ATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCC 14097 Query 1848 CACATCGTCTTCCCTGTTCGACTATCACCTTCGACTATCAAACTCATAGGTC-TCAATGG 1906 ||| ||||||||||||| | ||||| || | | | |||| | |||| | ||||| Sbjct 14098 CACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGG 14157 Query 1907 CCGCGCAGCGGAACCCCTTCCAAAATACTCATCCGCCCACTCTTGCATCTCGTCGGGAAC 1966 ||||||||||| | |||| || || ||| | ||||| ||| ||| || Sbjct 14158 CCGCGCAGCGGCATCCCT---AACATTTTCAGCTGCCCA-----GCA-CTC------AA- 14201 Query 1967 GTTAGTGAAGGAGGATAGGGGAAACGGAGGAACCCACGGCTCCGGAGCCTTTGTGAAAAT 2026 || ||||||| || ||| ||| ||| | || || |||| |||| || Sbjct 14202 -TTGTTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATAT 14260 Query 2027 TCTATTTAAATTAGAATTTAAATTGTGAAATTGAAAAAGAAATTTTTCCGGCAATTTCTC 2086 || || ||| || | | || ||| ||| ||||||| ||||| ||| | |||| ||| || Sbjct 14261 TCGATCTAATTTTGGAACTATATTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTC 14320 Query 2087 CCTAATTATTTGCAGAGC--CGTCTGTTTATCCGGAGCATTTAACGCCTCAGCTGCAGCA 2144 ||||| || || || | || || || | |||| ||||||| || || | || Sbjct 14321 TCTAATAATAGAAAGCGCTTCTTCAATTGAT--GTAGCACTTAACGCTTCTGCAGATACA 14378 Query 2145 TCATTAGCTGTCTGTTGGCCTCCTCTAGCACTTCTTCCGTCGACCTGGAACTGTCCCCAT 2204 ||||| | ||| ||| |||||||||||| || ||| |||| || || | ||||| Sbjct 14379 TCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAG 14438 Query 2205 TCAATTGTATCTCCGTCTTTGTCGATGTAGGACTTGACGTCGGAGCTGGATTTAGC 2260 || | ||| | |||||| ||||||| ||| || || || |||||||| Sbjct 14439 TCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGC 14494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8451357256156