Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_020254.1 Length=2664 Score E Sequences producing significant alignments: (Bits) Value seq19028 118 2e-23 >seq19028 Length=31091 Score = 118 bits (130), Expect = 2e-23 Identities = 240/351 (68%), Gaps = 14/351 (4%) Strand=Plus/Plus Query 1556 TTTTCCTCCTTGTCGAGATACTCTTTATAACTGGCCCCCTCTCCAGGATTGCAGAGCACG 1615 |||||||||| |||| |||||||||| |||| ||||||||||| | | | Sbjct 13831 TTTTCCTCCT---CGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1616 ATTGATGGGATACCTCCTTTAATCTTTCTTGGCTTGCCGTACTTGCAATTTGACTG--CC 1673 |||| || || || || || |||||| ||| | ||||| || | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACC 13945 Query 1674 ACTCTTTTTGAGCACCAATCAATTCCTTCCAGTGCTTTAGCTTTAGATAATGGGGTGTGA 1733 | | |||| || || || || || || |||||||||| |||||| || || Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAG------ATAATGCGGATCGA 13999 Query 1734 CATCATCGATGACGTTATACTCAGCATCGTCTGAGTAGACCCGGGAATTGAAATCCAGAT 1793 | | ||| |||| ||||||| |||| | ||| || | ||| ||||| | || Sbjct 14000 CGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAAT 14059 Query 1794 GGCCACTTAAGTAATTATGTGGGCCTAATGCTCGAGCCCACATCGTCTTGCCCGTTCGAG 1853 | || | || |||||||||||| ||||| | || |||||| ||||| || |||| || Sbjct 14060 GACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAG 14119 Query 1854 AGTCACCCTCAACAATTAAACTTATGGG-CCTCTCTGGTCGCGCAGCGGCA 1903 | |||||||||| | | ||| |||| | | ||| |||||||||||| Sbjct 14120 ACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCA 14170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8412971076340