Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_020255.1 Length=2690 Score E Sequences producing significant alignments: (Bits) Value seq19028 181 2e-42 >seq19028 Length=31091 Score = 181 bits (200), Expect = 2e-42 Identities = 515/778 (66%), Gaps = 39/778 (5%) Strand=Plus/Plus Query 1525 TGTGAGGGTGATGAAGATAGCATTATGGAGCGTCCAGTTTTTTAAACTTGCATTTTCCTC 1584 ||||| |||| ||| |||||||| | | ||| |||||||| | ||||| || Sbjct 13776 TGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTC 13835 Query 1585 CTTCTGGAGGAAATCTTTATAGCTGGCCCCCTCTCCTGGATTGCAAAGCACGATTGATGG 1644 || || |||||| ||||||||||||| || |||||||| | | ||||| || Sbjct 13836 CTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGG 13895 Query 1645 GATCCCTCCTTTAATTTGAACTGGCTTTCCGTATTTACAATTTGACTG--CCAATCCTTT 1702 ||||| || || || | || ||| |||||||||| | ||| ||| ||||| || Sbjct 13896 TATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACCAATTGCTT 13953 Query 1703 TGGGACCCAATGAGTTCTTTCCAGTGCTTTAGCTTTAGGTAGTGCGGGGGGACGTCATCG 1762 |||| ||| || | ||||| |||||||||| | | ||||| ||||| ||| Sbjct 13954 TGGGCCCCCATAAACTCTTTAAAGTGCTTTAGAT------AATGCGGATCGACGTTATCA 14007 Query 1763 ATGACGTTATATGCCACG--TCATTTGAATAAACCCTGGAATTAAAATCCAGGTGTCCAC 1820 |||| |||||| ||| | | ||||||||||| | ||| ||||| | || || | Sbjct 14008 ATGATGTTATA--CCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGC 14065 Query 1821 TTAAATAGTTATGGGCCCCCAACGCACGAGCCCACATCGTCTTCCCCGTTCGACTATCAC 1880 || || ||||| | || || | | |||||| |||||||| |||| | |||| Sbjct 14066 ATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCAC 14125 Query 1881 CCTCGATGATGATACTAACAGGTC-TCTCCGGCCGCGCAGCGGCACCTCTCCCGAA-ATA 1938 |||| |||| ||||| |||| | ||||||||||||||| |||| || || Sbjct 14126 CCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCA----TCCCTAACATT 14181 Query 1939 AGCATCAGCCCAATCTTGAATCTCGTCCGGAACGTTAGTGAATGAGGATAGTGGAAAAGG 1998 || | ||||| | | ||| || || |||| || || |||||| Sbjct 14182 TTCAGCTGCCCA-----GCA-CTC------AA--TTGTTGAAGGAAGAACAACTAAAAGG 14227 Query 1999 AGGAGTCCATGGCTCAGGAGCTTTTTTGAAAATTCTATCAAGGTTACTTGA--TAGGTTG 2056 | | | || ||||||| |||| |||| ||| | || | || || || Sbjct 14228 ACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTT--TGGAACTATATTA 14285 Query 2057 TGATATTGGAAGAGAAACTTTTCCGGCAGCTTCTCTTTGATGATTCTCATAGCCTCTTCC 2116 |||||||| || ||||||||| | |||| || ||| | || || | || ||||| Sbjct 14286 TGATATTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCA 14345 Query 2117 TTTGTTCCAGCATTTAACGCCTCAGCTGCAGCGTCATTAGCTGTCTGTTGACCTCCTCTA 2176 ||| | |||| ||||||| || || | | ||||| | ||| ||| |||||||||| Sbjct 14346 ATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTA 14405 Query 2177 GCACTTCTCCCGTCGATCTGGAACACTCCCCATTCGATGGTGTCACCGTCCTTCTCGACG 2236 ||| || || ||||| || || ||||| ||| || |||| ||| ||| ||| | Sbjct 14406 GCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATG 14465 Query 2237 TATGACTTAACATCGGAGCTGGATTTAGCTCCCTGTATGTTTGGATGGAAATGTGTTG 2294 ||| ||||||||| || |||||||| || | |||||| ||| ||||| || Sbjct 14466 TATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTGGTG 14522 Score = 100 bits (110), Expect = 5e-18 Identities = 253/377 (67%), Gaps = 36/377 (10%) Strand=Plus/Plus Query 905 GAATCATACGGAGAACGCTCTGTTATTGTATATGGCATGTACTCATGCCTCAAAACCCGT 964 || |||||| || || || |||| |||||| | |||||||| || || || || Sbjct 13080 GACTCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 965 GTATGCAACGCTTAAGATTCGGATCTATTTTTATGATTCGATTTCAAATTAATAAATTTT 1024 ||| || | | | || | ||||||||||| | |||||||||||||| || Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1025 GAATTTTATTGAATGATTTTCGAGTACATG----GTTTACATA-TGACCTGTCTGTCGAG 1079 |||||||||| ||||| ||| ||||||| |||| | | | || | || | Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACAT---TGAATA- 13252 Query 1080 AAACGA-----ACAGCTCTAATTACATTATTAATTGAAATAACGCCTAATCGATCTAGAT 1134 | || ||||||||||| | ||| ||||| |||||| |||||||| |||| | Sbjct 13253 ATACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAA 13312 Query 1135 ACA--ATAAAACTAAATACTTGAAT-CTATTTAAA-----TATGTCGTCCCAGAAGCTGT 1186 | || | || |||| || ||| || || | | ||||||| || | || Sbjct 13313 ATTTCATTACACGAAAT--TTAAATACTCTTAAGAAAACGTATGTCG-----GAGGACGT 13365 Query 1187 CACTGATGTCGTCCAGACCTGGAAATTGAGGAATGCTTTGTGGAGATCCAATACTTTCCT 1246 | || |||| || || ||| |||||||| |||||||| |||| || | | ||||| Sbjct 13366 AAACGA----GTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCT 13421 Query 1247 CAGGTTGTGGTTGAATC 1263 ||||||||||||||||| Sbjct 13422 CAGGTTGTGGTTGAATC 13438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8496141132608