Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_020256.1 Length=2649 Score E Sequences producing significant alignments: (Bits) Value seq19028 158 2e-35 >seq19028 Length=31091 Score = 158 bits (174), Expect = 2e-35 Identities = 464/698 (66%), Gaps = 43/698 (6%) Strand=Plus/Plus Query 1545 TTTTCCTCTTTGTCGAGGAAATCTTTATAGCTAGCCCCCTCTCCAGGATTGCAGAGCACG 1604 |||||||| | ||||||| ||||||||||| | ||||||||||| | | | Sbjct 13831 TTTTCCTCCT---CGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1605 ATTGATGGGATACCCCCTTTAATTTGAACAGGCTTTCCGTATTTGCAATTTGACTG--CC 1662 |||| || || || || || || | |||||| |||||||||| | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACC 13945 Query 1663 AGTCTTTTTGAGCACCAATCAGTTCCTTCCAGTGCTTTAACTTTAGATAATGCGGGGTGA 1722 | | |||| || || || | || || |||||||| ||||||||||| || Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTT------AGATAATGCGGATCGA 13999 Query 1723 CATCATCGATGACGTTGTACTCAGCGTCGTCTGAGTAAATTCTTGGATTGAAGTCCAGGT 1782 | | ||| |||| ||| ||| || | | ||| |||||| | ||| || || | | Sbjct 14000 CGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAAT 14059 Query 1783 GTCCACTCAGATAATTATGTGGGCCTAACGCACGAGCCCACATTGTCTTCCCCGTTCGAG 1842 | || | || ||||||||||| ||||| | | |||||| ||||||||| |||| || Sbjct 14060 GACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAG 14119 Query 1843 AGTCACCCTCTACAATTAAACTTATGGGTC-TTTCTGGCCGCGCAGCGGCACCTCTCCCA 1901 | |||||||| | | | ||| |||||| || |||||||||||||||| | || | Sbjct 14120 ACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATC---CCTA 14176 Query 1902 AAATAATCGTCAGCCCACTCCTGCATCTCGTCGGGAACGTTAGTGAAGGAGCAGAGAAGT 1961 | || || | ||||| ||| ||| || || ||||||| | | || | Sbjct 14177 ACATTTTCAGCTGCCCA-----GCA-CTC------AA--TTGTTGAAGGAAGA-ACAACT 14221 Query 1962 -GACGGAGGAGCCCATGGTTCCGGAGCCTTGGAA--AAAATCCTATCTAGGTTTGAATTA 2018 | ||| | | | ||||| |||| || | || || | ||||| |||| | Sbjct 14222 AAAAGGACTAACATAAGGTTCAGGAG--GGGGCATGAATATTCGATCTAATTTTGGAACT 14279 Query 2019 AGATTATGGAACTGAAATAAGTATTTTTCAGGGATTTTTTCCTTTATTATTTGAAGAGCA 2078 | |||||| | ||||||| | ||| | || ||||||| || || || | ||| ||| Sbjct 14280 ATATTATGATATTGAAATAGAAACTTTGCTGGCATTTTTT-CTCTAATAATAGAA-AGC- 14336 Query 2079 GCTTCTT---TTGTAGCTGCGTTTAATGCCTCTGCTGCAGCGTCGTTAGACGTTTGGCAA 2135 ||||||| ||| | || |||| || ||||| | | || || | || || || Sbjct 14337 GCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAA 14396 Query 2136 CCTCCTCTAGCACTTCTGCCGTCGACCTGGAATTCTCCCCATTCCATGGTGTCTCCGTCT 2195 |||||||||||| || || |||| || || | ||||| || || || | |||| Sbjct 14397 CCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCT 14456 Query 2196 TTCTCGACGTAGGACTTGACGTCGGACGATGATTTAGC 2233 ||| ||| ||| ||| || || || ||||||||||| Sbjct 14457 TTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGC 14494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8364988351570