Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_020473.1 Length=2743 Score E Sequences producing significant alignments: (Bits) Value seq19028 206 5e-50 >seq19028 Length=31091 Score = 206 bits (228), Expect = 5e-50 Identities = 255/345 (74%), Gaps = 9/345 (3%) Strand=Plus/Plus Query 1629 TTCTTTTCTTGGTCCAAGTATTCTTTATAGCTTGAATTTGGACCTGGATTGCAGAGGAAG 1688 || ||||| | || | | | ||||||||||| ||| | ||||| |||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1689 ATTGTTGGGATACCGCCTTTAATTTGAACTGGCTTTCCGTACTTTGTATTTGATTG-CCA 1747 ||||| || || || || || || | || ||| ||||||| ||| || | | | ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTT-GCTGGACCA 13946 Query 1748 GTCTCTTTGGGCCCCCATGAATTC------GTGCTTTAGATATTGCGGATCGACGTCATC 1801 | |||||||||||||| || || |||||||||||| ||||||||||||| ||| Sbjct 13947 ATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATC 14006 Query 1802 GATGACGTTGTACCACGCTTCATTACTGTACACTTTTGGACTTAAGTCCAAATGGCCACA 1861 |||| ||| ||||| || | ||| || | ||| | | || || ||||| || || Sbjct 14007 AATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCA 14066 Query 1862 AAGATAATTATGTGGACCCAAAGACCTGGCCCACATTGTCTTCCCCGTACGACTATCACC 1921 || ||||||||||| || ||||| || |||||| ||||||||| || | | ||||| Sbjct 14067 TAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACC 14126 Query 1922 CTCGATCACTATACTCACCGGTC-TCAAGGGCCGCGCAGCGGCAT 1965 ||| || || |||||| |||| | || |||||||||||||||| Sbjct 14127 CTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCAT 14171 Score = 167 bits (184), Expect = 4e-38 Identities = 258/364 (71%), Gaps = 11/364 (3%) Strand=Plus/Plus Query 942 GAATCATAGTGAGAATGCTTTGATGTTGTATATGGCATGTACTCATGCCTCCAATCCCGT 1001 || ||||| ||| ||||| ||| |||||||| | |||||||| || ||||| || Sbjct 13080 GACTCATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1002 GTATGCTACTCTGAAGATACGGATCTATTTCTACGATTCGGTCACAAATTAATAAAGATT 1061 ||| |||| ||| | ||| | ||||| || || || |||||||||||| ||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1062 GAATTTTATTACGTTTGAACTTT--GTACATAAACTGTTTGCGTTAATACATTCCATAAT 1119 |||||||||| | | || || |||||| ||||||||| | |||||| ||||| Sbjct 13197 GAATTTTATTTCAT--GATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAAT 13254 Query 1120 ACATGATCTACAGCCCTAATTACATTGTTGATACTAATTACACCCAAATTATCAATAAAT 1179 |||| |||||||| ||||| | |||||| |||||||| ||||| || || | |||| Sbjct 13255 ACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAAT 13314 Query 1180 TTCAACACTTGGGTCCTAAATACTCTTAAGAAACGACCAA--TCTGAAGGTGTGAGTTCG 1237 |||| || | ||||||||||||||||| || | || || | || | | Sbjct 13315 TTCATTACACGAAATTTAAATACTCTTAAGAAA--ACGTATGTCGGAGGACGTAAACGAG 13372 Query 1238 TCCAGATGCGGAAGGTTAGGAAACATTGGTGAATCCCCAGTGCTTTCCTCAGGTTGTAGT 1297 ||| ||| |||| | |||||| || ||||| |||| | ||||||||||||| || Sbjct 13373 TCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGT 13432 Query 1298 TGAA 1301 |||| Sbjct 13433 TGAA 13436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8665680093462