Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_021205.1 Length=2744 Score E Sequences producing significant alignments: (Bits) Value seq19028 264 2e-67 >seq19028 Length=31091 Score = 264 bits (292), Expect = 2e-67 Identities = 717/1092 (66%), Gaps = 79/1092 (7%) Strand=Plus/Plus Query 955 CATACTGAAAATGCTCTGTTGTTGTATATGGCATGTACGCATGCCTCTAATCCCGTGTAT 1014 |||||||||||||| ||||||||||| | || ||||| |||||||| || ||| Sbjct 13084 CATACTGAAAATGCA---TTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1015 GCTACTTTGAAAGTGAGGAGTTATTTCTATGACTCAGTCACGAATTAATAAAGATTAAAT 1074 |||| ||| | | |||||||| ||||| || | |||||||||| ||| ||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 1075 TTTATTACATGAGAACTTTGTACAAATGTTGTTTGCGTTAATGCGTCCCATAATACATAA 1134 |||||| ||||| | ||||| ||||||| | | | | ||||||||| Sbjct 13201 TTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATTG 13260 Query 1135 TTCACTGCTCTAATTACATTATTCAAACTAATTACACCCAAATTATTGAGAAACTTCAAA 1194 | || |||||||| | ||| || | |||||| ||||| || | | ||| |||| Sbjct 13261 TCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCATT 13320 Query 1195 ACTTGTGTCCTAAATACTCTTAAGAAACGACCAGTCTGAAGGTGTGAGTTCGTCCATATC 1254 || | ||||||||||||||||| ||| || | || | |||| ||| Sbjct 13321 ACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGATC 13380 Query 1255 CGGAAGTCCAGAAAACATTGGTGCATCCCCAGTGCTTTCCTCAGGTTGTAGTTGAATTGG 1314 ||||| || ||| || ||| | |||| | ||||||||||||| ||||||| | Sbjct 13381 TTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCGA 13440 Query 1315 ATCCTGACCTTC-ACTATGTCGTTGTTCGACAGGAAGGGCCTGTT-TTGTAGTTCCGTTA 1372 || || ||| | ||||||| | |||| || ||| |||| ||| | | Sbjct 13441 ATT-TGTATTTCGATTATGTCGGTTGTCGAATTTGTTGGTCTGAGATTGTGGTTGAGG-A 13498 Query 1373 TCTTGAAATACAGGGG-ATTTGTTATCTCCCAGATA------------AAA-------AC 1412 |||||||||| || | | ||| ||||| ||| ||| || Sbjct 13499 TCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGACTAGAC 13558 Query 1413 GCCATTCTCTGCCTGAGTGGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGGTTGGCGC 1472 ||||||| || || ||||||||| ||||||||||||| ||||||| | | Sbjct 13559 GCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGACCAGAAC 13618 Query 1473 AGTTAAGTGAGCTGAAATAAGAACAACCACAGGGAAGGTCAATCCTCCGTCTCCTGGTTA 1532 || ||| |||| ||||| ||||| || ||||| | | | ||| ||| || Sbjct 13619 AGCTAATATTTTTGAATATTGAACATCCACAAGGCAGGTCTAGTCGTCTTCTTCTGATTT 13678 Query 1533 TTTTCTTCTTGGCTATCCTG---------------TGCTGGACTTTGAT----------- 1566 | |||||||| ||||| | |||| ||| || Sbjct 13679 GTCTCTTCTTGA-TATCCGGATATGTAAATGAGGTTGCTTTCCTTGTATAATGTCTATGC 13737 Query 1567 --------GGGTA------CCTGA--GTACATTGGTTCGGTGATGCTGACGAAGATTGCA 1610 || || |||| | | | ||||| |||||| || ||| |||| Sbjct 13738 ATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTGTAGAATTCTGCA 13797 Query 1611 TTCTTTATTGCCCACGACTTTAATGCTGTGTTCTTTTCCTCGTCTAGGTACTCTTTATAG 1670 || | | | ||| |||||| | || |||||||| || ||| ||||||||||| Sbjct 13798 TTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTATAG 13857 Query 1671 CTGGAATTGGGCCCTGGATTGCACAGGAAGATAGCGGGAATGCCACCTTTAATTTGAACC 1730 |||||| | || || |||||||||| |||||| | || || ||||| || || | || Sbjct 13858 CTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACA 13917 Query 1731 GGCTTTCCGTACTTGGTAT-TTGATTG-CCAGTCCCTTTGGGCCCCCATGAATTCTTTAA 1788 ||| ||||||| || || ||| | | ||| | |||||||||||||| || ||||||| Sbjct 13918 GGCCTTCCGTATTT--TACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAA 13975 Query 1789 AATGTTTTAGATAGTGCGGATCGACGTCATCAATGACGTTGTACCAGGCATCATTATTGT 1848 | || |||||||| ||||||||||||| |||||||| ||| |||||||||| || ||| Sbjct 13976 AGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTAT--TTGA 14033 Query 1849 ATACCTTT--GGACTTAAATCAAGATGACCACACAAATAATTATGGGGTCCTAATGACCT 1906 ||| ||| | | ||||| | |||||| || | |||||||| |||||||| || || Sbjct 14034 ATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCT 14093 Query 1907 GGCCCACATTGTCTTCCCCGTCCGGCTATCTCCTTCGATAACTATACTTATCGGTC-TTA 1965 |||||| ||||||||| || | || || || || || ||||| | |||| ||| Sbjct 14094 TGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTA 14153 Query 1966 ATGGCCGCGCAG 1977 |||||||||||| Sbjct 14154 ATGGCCGCGCAG 14165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8668878941780