Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_021245.1 Length=2742 Score E Sequences producing significant alignments: (Bits) Value seq19028 248 2e-62 >seq19028 Length=31091 Score = 248 bits (274), Expect = 2e-62 Identities = 306/417 (73%), Gaps = 1/417 (0%) Strand=Plus/Plus Query 1585 AATGGTTGTGTGATGGTGATGAATTCAGCATTCTTTAATGCCCAGTCTTTGAGTGCTGAA 1644 |||||||||||||||||| |||||| ||||| | || | ||| | ||| | | | Sbjct 13768 AATGGTTGTGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATA 13827 Query 1645 TTCTTTTCCTCGTCCAAGTATTCTTTATACGATGATGTTGGTCCTGGATTGCAGAGGAAG 1704 || |||||||| || | | | |||||||| || || || || |||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1705 ATTGTTGGGATCCCACCTTTAATTTGAATTGGTTTCCCGTACTTTGTGTTGCTTTGCCAG 1764 ||||| || |||||||| || || | | || | ||||| ||| ||||| ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAA 13947 Query 1765 TCCCTCTGTGCCCCCATGAACTCTTTAAAGTGCTTTAGGAAGTGGGGGTCTACGTCATCA 1824 | || || |||||||| |||||||||||||||||||| | || || || |||| |||| Sbjct 13948 TTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCA 14007 Query 1825 ATGACGTTGTACCAGGCATCATTACTGTATACTTTTGGACTGAGGTCAAGATGACCACAC 1884 |||| ||| |||||||||| ||| || | ||| | | | || | |||||| || Sbjct 14008 ATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCAT 14067 Query 1885 AAATAATTATGTGGGCCTAACGATCTAGCCCACATTGTCTTCCCTGTACGACTATCACCC 1944 | ||||||||||| ||||| ||||| |||||| |||||||||||| | | |||||| Sbjct 14068 AGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCC 14127 Query 1945 TCTACTACAATACT-TACAGGCCTCCACGGCCGCGCAGCGGCATCCCTGACATTCTC 2000 || | |||||||| | | | | | |||||||||||||||||||| ||||| || Sbjct 14128 TCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTC 14184 Score = 217 bits (240), Expect = 3e-53 Identities = 282/384 (73%), Gaps = 7/384 (2%) Strand=Plus/Plus Query 958 TCATACTGAGAATGCTTTGTTATTGTATATGGCTTGTACTCATGCCAGTAATCCAGTGTA 1017 ||||||||| ||||| ||||| |||||| || |||||||| |||||| || || Sbjct 13083 TCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGTATA 13139 Query 1018 TGCTACTTTGAAGATCA-GAATCTATTTTTATGATTCTGTTCAAAATTAATAAATATTGA 1076 | |||| ||| || || | | ||||||||||| ||| ||||||||||||||||| Sbjct 13140 TTGTACTATGA-GAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGA 13198 Query 1077 ATTTTATTATATCAGAAACTTGTACATCGATTGTTTTTTCAAATACATCGTACAGTACAT 1136 |||||||| || | | | ||||||| | ||||| |||| ||||| | | | ||||| Sbjct 13199 ATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACAT 13258 Query 1137 GATCGACTGCCCTAATTACATTGTTAATGCTAATAACACCTAACCTATCTAAATATTTCA 1196 || || || ||||| | ||||||||| |||||||||||||| | |||||| |||||| Sbjct 13259 TGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCA 13318 Query 1197 -TACATTGATATTTAAATACTCTTAAGAAACGCCCAGTCTGAGGATGTAAATGAGTCCAG 1255 |||| || |||||||||||||||||||| ||| ||||| ||||| |||||| | Sbjct 13319 TTACA-CGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTG 13377 Query 1256 ATTTTGCAGATCAGAAAACACCGGTGTATCCCCAACGCTTTCCTCAGGTTGTAGTTGAAC 1315 || ||| || | || ||| ||| | || | ||||||||||||| |||||| Sbjct 13378 ATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAAT 13437 Query 1316 TGTATTTGGACTGTTATGATGTCG 1339 | ||||| | | || |||||| Sbjct 13438 CGAATTTGTATTTCGATTATGTCG 13461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8662481245144