Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_021579.1 Length=2669 Score E Sequences producing significant alignments: (Bits) Value seq19028 152 9e-34 >seq19028 Length=31091 Score = 152 bits (168), Expect = 9e-34 Identities = 247/351 (70%), Gaps = 12/351 (3%) Strand=Plus/Plus Query 1504 GAATTTTGCATTGTGGAGAGTCCAGTTCTTGAGTGACAGATTCTCCTCTTTGTCGAGGAA 1563 ||||| |||||| || | || ||| || || | | | ||| | || | |||||||| Sbjct 13788 GAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAA 13847 Query 1564 CTCTTTATAACTGGACCCCTCGCCTGGATTGCAAAGCACGATTGAGGGTATGCCGCCTTT 1623 ||||||||| ||||| || |||||||| | | ||||| ||||| || || || Sbjct 13848 CTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTT 13907 Query 1624 AATTTGAACCGGCTTTCCGTATTTGCAATTTGATTG-CCAGTCCCTTTGGGCCCCAATCA 1682 || | || ||| |||||||||| | ||| | | ||| | ||||||||||| || | Sbjct 13908 TATCTTTACAGGCCTTCCGTATTTT-ACCTTGCTGGACCAATTGCTTTGGGCCCCCATAA 13966 Query 1683 ATTCTTTCCAGTGCTTCATCTTTAGGTAGTGCGGTGCGACGTCATCAATGACGTTATAAT 1742 | ||||| ||||||| ||| || ||||| |||||| |||||||| |||||| Sbjct 13967 ACTCTTTAAAGTGCTT------TAGATAATGCGGATCGACGTTATCAATGATGTTATA-- 14018 Query 1743 CCA--CATCATTTGAATAAACCCTAGAATTGAAATCCAGGTGTCCACTCAAATAATTGTG 1800 ||| ||| ||||||||||| || ||| ||||| | || || | | ||||| || Sbjct 14019 CCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATG 14078 Query 1801 AGATCCCAAAGCACGTGCCCACATCGTCTTGCCGGTTCTTGAATCACCCTC 1851 | ||| |||| | ||||||| ||||| || ||||| || |||||||| Sbjct 14079 TGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTC 14129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8428965317930