Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_022005.1 Length=2597 Score E Sequences producing significant alignments: (Bits) Value seq19028 123 4e-25 >seq19028 Length=31091 Score = 123 bits (136), Expect = 4e-25 Identities = 240/349 (69%), Gaps = 14/349 (4%) Strand=Plus/Plus Query 1497 TTTTCCTCTTTGTTGAGGAAATCTTTATAACTGGCACCCTCACCAGGATTGCAAAGCACG 1556 |||||||| | | ||||| |||||||| |||| | |||||||||||| | | | Sbjct 13831 TTTTCCTCCTCG---AGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1557 ATTGATGGGATCCCTCCTTTAATGACAACTGGCTTGCCGTACTTGCAATTTGACTG--CC 1614 |||| || ||||| || || || || ||| | ||||| || | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACC 13945 Query 1615 ATTTCTTTTGGGCCCAAAAAAGTTCTTTCCAGTGCTTTAGCTTTAGATAGTGCGGTGCGA 1674 | || ||||||||| | || ||||| |||||||||| ||| ||||| ||| Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAG------ATAATGCGGATCGA 13999 Query 1675 CATCATCAATGACGTTATACTCCACTTCGTCCGAGTACACTCTGGAATTGAAGTCTAGGT 1734 | | |||||||| ||||||| | | | || || | | | ||| || |||| | Sbjct 14000 CGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAAT 14059 Query 1735 GTCCACTAAGATAATTATGTGGGCCTAATGATCGAGCCCACATCGTCTTTCCTGTTCTTG 1794 | || | || ||||||||||| ||||| |||| |||||| ||||| |||||||| | Sbjct 14060 GACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAG 14119 Query 1795 AATCACCTTCGACTATGAGACTTAATGGTC-TTTCTGGCCGCGCAGCGG 1842 | ||||| || | | | ||| |||| || |||||||||||||| Sbjct 14120 ACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGG 14168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8198648239034