Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_022007.1 Length=2624 Score E Sequences producing significant alignments: (Bits) Value seq19028 150 3e-33 >seq19028 Length=31091 Score = 150 bits (166), Expect = 3e-33 Identities = 237/336 (71%), Gaps = 9/336 (3%) Strand=Plus/Plus Query 1530 TCGAGGAAATCTTTATAGCTGGCCCCCTCTCCTGGATTGCACAGCACGATTGATGGTATG 1589 |||||||| ||||||||||||| || |||||||||| | ||||| ||||| Sbjct 13840 TCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATC 13899 Query 1590 CCACCTTTAATTTGAACTGGTTTTCCGTATTTGCAATTTGTTTG-CCAGTTCATCTGGGC 1648 ||||| || || | || || |||||||||| | ||| | | ||| || | ||||| Sbjct 13900 CCACCCTTTATCTTTACAGGCCTTCCGTATTT-TACCTTGCTGGACCAATTGCTTTGGGC 13958 Query 1649 CCCAATCAACTCTTTCCAGTGCTTTAGCTTTAGGTAGTGCGGAGCTACGTCATCAATGAC 1708 ||| || |||||||| ||| ||||||| || |||||| | |||| |||||||| Sbjct 13959 CCCCATAAACTCTTTAAAGT------GCTTTAGATAATGCGGATCGACGTTATCAATGAT 14012 Query 1709 GTTATACTCCACATCATTTGAATAGACCCTAGAATTGAAGTCTAGGTGACCACTCAAGTA 1768 ||||||| ||| ||||||||| | || ||| || |||| ||||| | | ||| Sbjct 14013 GTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTA 14072 Query 1769 ATTATGCCTACCTAGAGCACGAGCCCACATCGTCTTGCCAGTCCTCGAATCACCTTCGAC 1828 |||||| |||| || | |||||| ||||| || || || || ||||| || | Sbjct 14073 ATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAAT 14132 Query 1829 GATGATACTAATAGCTC-TAATTGGCCGCGCAGCGG 1863 || ||||| | | || | | |||||||||||||| Sbjct 14133 GACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGG 14168 Score = 123 bits (136), Expect = 4e-25 Identities = 252/368 (68%), Gaps = 16/368 (4%) Strand=Plus/Plus Query 846 GAATCATACGGAGAATGCTTTGTTATTGTACATGGCATGTACTCATGCCTCTAATCCTGT 905 || |||||| || ||||| ||||| ||| || | |||||||| ||||||||||| Sbjct 13080 GACTCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 906 ATATGCGACATTGAAAATTCGGATCTATTTTTATGATTCGATAACAAATTAATAAAATTT 965 |||| || ||| || || | ||||||||||| || |||||||||||| || Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 966 GTATTTTATTTCATGATTCTCGAGTACAT---CTG-TTACATAATGTC--TGTCTGTTGC 1019 | ||||||||||||||| || ||||||| ||| || | ||| | || | | | Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATAC 13256 Query 1020 GAAACGAACAGCTCGGATTACATTGTTTATTCCAATAGCTCCTAAGCTATCTAAGTAAGA 1079 ||||||| || | |||||| || | |||| | ||||| | ||||| | Sbjct 13257 ATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTT 13316 Query 1080 CATTACAAGAAATTTGAATCTACTTA--AATATGTCCGTCCAGAAGCTGTCATCGAAGTC 1137 ||||||| ||||||| ||| |||| || | || || | || | || | ||| Sbjct 13317 CATTACACGAAATTTAAATACTCTTAAGAAAACGTATGT-CGGAGGACGTAAACGA---- 13371 Query 1138 GTCCAGATTTGGAAGTTGAAGTACGCTTTGTGGAGACCCAACGCTCTCCTCACGTTGTGG 1197 |||| ||| | |||||||| | | |||||||| ||| || | |||||| ||||||| Sbjct 13372 GTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGG 13431 Query 1198 TTGAACCG 1205 ||||| || Sbjct 13432 TTGAATCG 13439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8285017143620