Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_022229.1 Length=2775 Score E Sequences producing significant alignments: (Bits) Value seq19028 351 2e-93 >seq19028 Length=31091 Score = 351 bits (388), Expect = 2e-93 Identities = 1031/1567 (66%), Gaps = 105/1567 (7%) Strand=Plus/Plus Query 958 GAATCATACTGAGAATGCTCTATTATTGTATATGGCGTGTACTCATGCTTCTAATCCAGT 1017 || ||||||||| ||||| ||| |||||||| | |||||||| |||||||| || Sbjct 13080 GACTCATACTGAAAATGC---ATTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1018 GTAT-GTACACTGAAAATAAGGGTGTACTTCTACGATTCAATATCGAATTAATAAAATTT 1076 ||| |||| ||| || | | || || || || |||| |||||||||| || Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1077 ATATTTTATATCATGATGTTCTGTTACATCTGTTGTCTTTGCAATTACATTATACAAATA 1136 ||||||| ||||||| ||| |||||| ||| | |||||||||| | || || Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAA-TA 13255 Query 1137 CATGATCAACTGCTCTAATTACATTGTTAATGGAAATTACACCAATATTATCTAAATATC 1196 ||| || || |||||||| | ||||||||| ||| ||||| | |||||| || Sbjct 13256 CATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATT 13315 Query 1197 TAAGAACTTGATATTTAAATACTCTTAAGAAATGACCAGTCTGAGGCCGTAAGGTCGTCC 1256 | | || || |||||||||||||||||||| ||| |||| ||||| |||| Sbjct 13316 TCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCC 13375 Query 1257 AGATTCGGAAGTTGAGAAAACATTTGTGAATCCCCAACTCCTTCCTGATGTTGTGATTGA 1316 ||| ||||||||| ||| |||||||| || |||||||| | |||||| |||| Sbjct 13376 TGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGA 13435 Query 1317 ATCGGATTTGTATTGAAATTATGTCT-TTGTTCATGTTGAGTGGCCTCTCGTTGTGGCTG 1375 |||| ||||||||| |||||||| |||| | ||| ||| || |||||| || Sbjct 13436 ATCGAATTTGTATTTCGATTATGTCGGTTGTCGAATTTGT-TGGTCTGAGATTGTGGTTG 13494 Query 1376 GTGATCTTGAAATAGAGGGGATTGTT--TATCTCCCAGATA------------AAA---- 1417 |||||||||||| || | | | ||| ||||| ||| ||| Sbjct 13495 AGGATCTTGAAATATAGAA-ACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGAC 13553 Query 1418 ---ACGCCATTCGTTGCCTGATGAGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGGTT 1474 ||||||||| | || || |||||||||||| ||||||||||||| ||||||| Sbjct 13554 TAGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGACC 13613 Query 1475 GGTGCAGTTGATATG---GAGATAGTATGAGCAGCCGCAGTCTAGGTCCAGTCGCCTACG 1531 | ||| | |||| || ||| | || || || || ||||| ||||| || | Sbjct 13614 AGAACAGCTAATATTTTTGA-ATATT--GAACATCCACAAGGCAGGTCTAGTCGTCTTCT 13670 Query 1532 CCTGATTATTTTCTTCTTGG---CTAGCT-TGT-------GTTGGA--CCTTG------- 1571 |||||| | |||||||| | | | ||| |||| ||||| Sbjct 13671 TCTGATTTGTCTCTTCTTGATATCCGGATATGTAAATGAGGTTGCTTTCCTTGTATAATG 13730 Query 1572 -----------ATTGGCA---------CTTGA-GAACAGTGGCTCGTAGAGGGTGATGAA 1610 ||||| | || | ||| | ||| | || |||| ||| Sbjct 13731 TCTATGCATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTGTAGAA 13790 Query 1611 GGTTGCATTCTTCAGAGCCCAATTCTTTAGAGATATAtttttttCTTCGTCTAGATATTC 1670 |||||| | || || |||||| |||| ||||||||||| || || || | || Sbjct 13791 TTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTC 13850 Query 1671 TTTATATGATGATGTTGGGCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAAT 1730 |||||| || || || || |||||||| | |||||| || || || || || || || Sbjct 13851 TTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTAT 13910 Query 1731 TTGAATGGGCTTCCCGTACTTTGTATTGCTTTGCCAGTCCCTCTGGGCCCCCATGAATTC 1790 | | ||| | ||||| ||| ||||| ||| | || ||||||||||| || || Sbjct 13911 CTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTC 13970 Query 1791 TTTAAAATGCTTTAAATAATGCGGGTCTACGTCATCAATGACATTGTACCAGGCGTCGTT 1850 |||||| ||||||| ||||||||| || |||| |||||||| || |||||||| | || Sbjct 13971 TTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATT 14030 Query 1851 ACTGTACACTTTAGGACTCAGGTCTAGATGTCCACACAAATAATTGTGTGGGCCTAGAGA 1910 || | |||| | ||| |||| ||| || || | ||||| ||||| |||| ||| Sbjct 14031 TGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGA 14090 Query 1911 CCTGGCCCACATTGTCTTGCCGGTCCTGCTATCACCCTCTATTACAATACTGTTGGGTC- 1969 || |||||| |||||| || || || |||||||| || |||||||| ||||||| Sbjct 14091 TCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCG 14150 Query 1970 TCCATGGCCGCGCAGCGGCAGACATGACGTTCTCGGACACCCAGACTTCAAGTTCCTCAG 2029 | ||||||||||||||||| | | || || || | ||||| || ||| Sbjct 14151 TTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAG----CA-----CTC-- 14199 Query 2030 GAACTTGATTAAAAGAAGAAGATAAAAAAGGAGAAATGTAAGGAGCCGG-TGGCTCTTGA 2088 | ||| || || |||||| | ||||||| || ||||| | || || | || Sbjct 14200 --AATTG-TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATG- 14255 Query 2089 AAAATCCTATCTAAATTACTATTTAGATTATGAAATTGCAAAACAAAATCTTTAGGAGCT 2148 || || | |||||| || | || ||||||| |||| || | ||| | | || | Sbjct 14256 AATATTCGATCTAATTTTGGAACTATATTATGATATTGAAATAGAAACTTTGCTGGCATT 14315 Query 2149 AATTCTTTAATTACATTAAGAGC--CTCCGACTTACTTCCAG-AGTTAAGCGCCTGGGCG 2205 |||| |||| | | ||| || || | | | | | || | |||| ||| | || Sbjct 14316 TTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGA--TGTAGCACTTAA-CGCTTCTGCA 14372 Query 2206 TAAGCATCATTGGCTGATTGTTGTCCCCCTCTAGCGGACCTTCCATCGATCTGAAACTCA 2265 | ||||||| | || ||| || |||||||| || | ||||||||| ||||| | Sbjct 14373 GATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTG 14432 Query 2266 CCCCATTCGATGGTGTCTCCGTCCTTGTCAATATAGGACTTGACGTCAGAGCTGGATTTA 2325 ||||| ||| || || | ||| || | || || ||| || || || |||||| Sbjct 14433 CCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTA 14492 Query 2326 GCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTGGT-TGTGGA--GACCAGGTCGAAG 2382 || || | |||||| ||| ||||| || || || | ||| || | |||||| Sbjct 14493 GCGGATTGGAAGTTTGGGTGG-TATGTGGTG--CTAGTATTAGGATGGATGATATCGAAG 14549 Query 2383 AATCTGTTATTTGTGCACTGGTACTTTCCTTCGAACTGCATAAGCACAGGGAGATGTGGT 2442 ||| ||| | | || ||| |||||||| || ||||| || || ||| | Sbjct 14550 TGTCTAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGGGCATGGCTATGAAAT 14609 Query 2443 TCCCCAT 2449 ||||||| Sbjct 14610 TCCCCAT 14616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8764751579300