Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_022586.1 Length=2786 Score E Sequences producing significant alignments: (Bits) Value seq19028 179 7e-42 >seq19028 Length=31091 Score = 179 bits (198), Expect = 7e-42 Identities = 445/663 (67%), Gaps = 27/663 (4%) Strand=Plus/Plus Query 1718 CCTGGATTGCAAAGGAAGATAGTGGGAATTCCACCTTTAATTTGAACTGGCTTCCCGTAC 1777 || |||||||| | |||||| || || || ||||| || || | || ||| | ||||| Sbjct 13870 CCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTAT 13929 Query 1778 TTTG---TGTTGGATTGCCAGTCCTTCTGGGCCCCAATGAATTCCTTAAAGTGCTTTAGG 1834 ||| || |||| | | | ||| |||||||| || || || |||||||||||||| Sbjct 13930 TTTACCTTGCTGGAC--CAATTGCTT-TGGGCCCCCATAAACTCTTTAAAGTGCTTTAGA 13986 Query 1835 TATTGGGGGTCGACGTCATCAATGACGTTGTACCAAGCACTATTACTGTACACTCTTGGA 1894 || || || ||||||| |||||||| ||| ||||| ||| |||| || | | | | Sbjct 13987 TAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTA 14046 Query 1895 TTCAGGTCCAAGTGCCCACATAGATAATTATGTGGACCTAAAGACCGAGCCCAAACTGTT 1954 |||| || || || || ||||| ||||||||||| |||||||| | ||||| |||| Sbjct 14047 TTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTC 14106 Query 1955 TTACCTATCCTACTTGGCCCTTCTATTACAATACTAATGGG-CCTATCCGGCCGCGCAGC 2013 || ||| | ||| || || || |||||||| |||| | | ||||||||||| Sbjct 14107 TTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGC 14166 Query 2014 GGCATCCTTGATGTTATCAGCAGCCCAATTGCTGATAATATCAGGTACATTATTAAAAGA 2073 ||||||| | | || ||||| ||||| || ||| ||| || || || Sbjct 14167 GGCATCCCTAACATTTTCAGCTGCCCA---GC------ACTCA-----ATTGTTGAAGGA 14212 Query 2074 AGAAGATAAAAACGGAGAAGTATAAACTTCTACAGGAGGAGAAAAAATTCTATCTAAATT 2133 |||| | ||| ||| | |||| ||| ||| || || |||| |||||| || Sbjct 14213 AGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTT 14272 Query 2134 ATTATTAATATTATGGAATTGTAGAACAAAATCTTTTGGGCACAATTCCT-TAATAATTT 2192 | |||||||| |||| | | ||| | || |||| || || |||||| | Sbjct 14273 TGGAACTATATTATGATATTGAAATAGAAACT-TTGCTGGCATTTTTTCTCTAATAA-TA 14330 Query 2193 GTAAG-GCTTCAGCCTTATTCCCAGCATTTAATGCCTGAGCGTAGGCTTCATTAGCCGTC 2251 | ||| ||||| | | |||| |||| || | || | | ||||| | || Sbjct 14331 GAAAGCGCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTA 14390 Query 2252 TGTTGACCGCCTCTAGCAGATCTGCCGTCGATCTGGAACTCACCCCAGGTGAGTGT-ATC 2310 ||| ||| ||||||||||||| || ||||| || || | ||||| || |||| ||| Sbjct 14391 TGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCA-GTCGGTGTAATC 14449 Query 2311 CCCGTCCTTCTCGACGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGGATGTTGGG 2370 | ||| ||| ||| ||| ||| || || || |||||||| |||| ||| || Sbjct 14450 ACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGG 14509 Query 2371 GTG 2373 ||| Sbjct 14510 GTG 14512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8799938538195