Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_022645.1 Length=2804 Score E Sequences producing significant alignments: (Bits) Value seq19028 232 1e-57 >seq19028 Length=31091 Score = 232 bits (256), Expect = 1e-57 Identities = 559/839 (67%), Gaps = 33/839 (4%) Strand=Plus/Plus Query 1689 TTCTTTTCCTCTTCCAGAAACTCTTTATATGATGATGTTGGTCCTGGATTGCAGAGGAAG 1748 || |||||||| || || ||||||||||| || || || || |||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1749 ATAGTGGGAATGCCGCCTTTAATTTGAATCGGCTTCCCGTACTTTGTATTGCTTTGCCAG 1808 || || || || || || || || | | ||| | ||||| ||| ||||| ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAA 13947 Query 1809 TCCCTTTGGGCCCCCATAAATTCTTTGAAGTGCTTGAGGTAGTGTGGGTCGACGTCATCA 1868 | ||||||||||||||||| ||||| |||||||| || || || || ||||||| |||| Sbjct 13948 TTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCA 14007 Query 1869 ATGACGTTGTACCAGGCGTCGTTGCTGTAGACCTTTGGACTAAGATCCAAATGTCCACAC 1928 |||| ||| |||||||| | || || | || | | | ||| ||||| || || Sbjct 14008 ATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCAT 14067 Query 1929 AAGTAGTTGTGTGGTCCCAGAGATCGGGCCCACATCGTCTTCCCTGTCCTACTATCGCCT 1988 | ||| || |||||||| | ||||| |||||| ||||||||||| ||| || || Sbjct 14068 AGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCC 14127 Query 1989 TCTAGAACAATACTGATCGGTC-TCCATGGCCGCGCAGCGGGACTGCATATATTTTCGGA 2047 || | |||||||| | |||| | ||||||||||||||| | | | |||||| | Sbjct 14128 TCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGC 14187 Query 2048 TACCCATATTTCTATTTCGTCTGGGACGTGTGTAAATGAGGATGATAAAAACGGACTTAC 2107 | |||| || ||| || | || || || | ||| ||||| || Sbjct 14188 TGCCCAGCACTCAATT--GT------------TGAAGGAAGAACAACTAAAAGGACTAAC 14233 Query 2108 ATAAGTTTGTGGCGGGAGCTGGAAGATTCTATCTGCGTTAGCAGATATGTTATGGAACTG 2167 ||||| || || ||| || ||| |||| |||| || | | ||| ||||| | || Sbjct 14234 ATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATATTG 14293 Query 2168 TaaaaaaaaaGACTTC-GGATCTTTTTCTTTAATAATTTGAAGAGCTTCTGATTTAGAAG 2226 ||| | ||| | | || ||||||| ||||||| ||| |||||| | || | Sbjct 14294 -AAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATG 14352 Query 2227 AAGCATTCAACGCTTCTGCATATACCTGA---GCTAAATGCTGGCCCTCACCCCTTGCAC 2283 |||| | |||||||||||| |||| | | | | ||| || ||| || || ||| Sbjct 14353 TAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATG-TGAACCT--CCTCTAGCAG 14409 Query 2284 TTCTGGCATCGACTTGGAAAACTCCATCGTCAAGAAATTCCCCTCCCTTTTCAATGTAAG 2343 || |||||| ||| ||| || ||| | || | | || | ||||| Sbjct 14410 ATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATT 14469 Query 2344 CTTTGACATCGGACGATGATTTAGCTCCCTCAATGTTCGGATGGAAATGTGTTG-----A 2398 || ||||| || ||||||||||| | | ||| || ||| ||||| || | Sbjct 14470 TCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTGGTGCTAGTA 14528 Query 2399 TCGGGATGGGGAAATGAGATCGAAAAATCTCGGGTTGGTACATTGGAATTTACCTTCGAA 2458 | |||||| |||| |||||| ||| ||||| || |||| || |||||||| Sbjct 14529 TTAGGATGG----ATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCTTGCCTTCGAA 14584 Query 2459 TTGAATGAGAACATGGAGATGAGGCACCCCATCCTGATGTAGTTCTCTGCAAACCCTAA 2517 |||||| || ||||| |||| |||||||||| ||| |||| || || |||| Sbjct 14585 TTGAATAAGGGCATGGCTATGAAATTCCCCATCCTGGTGTTTTTCTTGACAGACTCTAA 14643 Score = 190 bits (210), Expect = 4e-45 Identities = 368/538 (68%), Gaps = 29/538 (5%) Strand=Plus/Plus Query 999 GAATCATACAGAAAATGCGTTGTTGTTGTATATGGCATGTACGCATGCCTCTAATCCAGT 1058 || |||||| |||||||| ||||||| |||| | || ||||| |||||||| || Sbjct 13080 GACTCATACTGAAAATGCATTGTTGT---ATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1059 GTATGCTACGCTTAAAATACGCATCTATTTTTATGATGCAGTAACAAATTAATAAAGGTT 1118 ||| ||| | | || ||||| ||||||||||| ||| |||||||||||| || Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1119 GAATTTTATTTCATGTTGCTCC-GTAACTTGAGTGTGTGGCCAGTAATACATTGTACAGG 1177 ||||||||||||||| | || ||| | | ||| || || | ||||||| | | Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAAT--TACATTGAATAAT 13254 Query 1178 ACATGATC-ACAGCTCTAAGTACAGTGTTAATGGAAATAACTCCTATCATATTTAAATAT 1236 |||| || |||||||||| | | ||||||| |||||| |||| | |||| || Sbjct 13255 ACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAAT 13314 Query 1237 TTGAGCACTTGATATCTAAATACTTTTAAGAAAAGACCAGTCGGAGGCTGTAAGGTCGTC 1296 || | || || || |||||||| ||||||||| |||||||| |||| ||| Sbjct 13315 TTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTC 13374 Query 1297 CAGACCTTGAAGTTGAGAAAACACTTGTGAATCCCCAATGCCTTCCTGATGTTGTGGTTG 1356 | || |||||||||||| ||| ||||||| || | ||||||| | |||||||||| Sbjct 13375 CTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTG 13434 Query 1357 AACCGTATCTGGAGTGTGATGATATC-GTGGTGCATGTTCCCTGGTCTCTTGTCGTGGTT 1415 || || || || | | ||| || || || || | || |||||| | |||||| Sbjct 13435 AATCGAATTTGTATTTCGATTATGTCGGTTGT-CGAATTTGTTGGTCTGAGATTGTGGTT 13493 Query 1416 GGTGATTGCGAAATAGAG-GGGATTTGTTATTTCCCAA-------------GTAA----- 1456 | ||| |||||| || | | |||||||||| |||| Sbjct 13494 GAGGATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGAC 13553 Query 1457 -AAACGCCATTCTTTGCTTGAGGCGCAGTGATGAGTTCCCCTGTGCGAGAATCCATGA 1513 | ||||||||| | ||||| | ||||||||| |||||||||||| |||||||| Sbjct 13554 TAGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGA 13611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8857517198205