Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_023023.1 Length=2753 Score E Sequences producing significant alignments: (Bits) Value seq19028 127 4e-26 >seq19028 Length=31091 Score = 127 bits (140), Expect = 4e-26 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 2282 TGTAATCACTGTCCTTCTCGATGTAGGACTTGACATCAGAGCTGGACTTAGCTCCCTGGA 2341 ||||||||| ||| ||| ||||||| ||| ||||| || || ||||| |||| Sbjct 14443 TGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGGA 14502 Query 2342 AGTTTGGGTGGAATTGGGTGGAGTTATTAGGGTGAGTGACATCGAAATGTCTGGGGTTTC 2401 ||||||||||| || |||| ||||||| || ||| |||||| ||||| ||||||| Sbjct 14503 AGTTTGGGTGGTATGTGGTGCTAGTATTAGGATGGATGATATCGAAGTGTCTAGGGTTTC 14562 Query 2402 GGAACTTGGATTTACCTTTGAACTGGATGAGGGCATGGATATGCAGAGACCCATCTTGGT 2461 || | | || |||| ||| || || ||||||||| |||| | |||||| |||| Sbjct 14563 TAAATTGTGCCTTGCCTTCGAATTGAATAAGGGCATGGCTATGAAATTCCCCATCCTGGT 14622 Query 2462 GTTTTTCTTGTGCCACTCTAAAGCA 2486 |||||||||| |||||||| || Sbjct 14623 GTTTTTCTTGACAGACTCTAAAACA 14647 Score = 100 bits (110), Expect = 5e-18 Identities = 94/117 (80%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 1741 ACTGGCTTTCCGTACTTTGTATTTGATTG-CCAGTCCCTTTGGGCCCCCATGAATTCTTT 1799 || ||| ||||||| ||| || | | | ||| | |||||||||||||| || ||||| Sbjct 13915 ACAGGCCTTCCGTATTTTACCTT-GCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTT 13973 Query 1800 AAAGTGCTTTAGGTAGTGGGGATCGACGTCATCAATGACGTTGTACCAGGCCTCATT 1856 |||||||||||| || || |||||||||| |||||||| ||| |||||||| | ||| Sbjct 13974 AAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATT 14030 Score = 84.2 bits (92), Expect = 4e-13 Identities = 95/127 (75%), Gaps = 3/127 (2%) Strand=Plus/Plus Query 970 TCATTCTGAGAATGCGTTAATGTTGTATATGGCATGTACTCATGCCTCTAACCCAGTGTA 1029 |||| |||| ||||| || ||||||||| | |||||||| ||||| || || || Sbjct 13083 TCATACTGAAAATGCATT---GTTGTATATTAGTTCAACTCATGCATCTAATCCTGTATA 13139 Query 1030 TGCTACTTTGAAGATACGGATCTATTTCTATGATTCCGTGACAAATTAATAAATATTGAA 1089 | |||| ||| | ||| | ||||| ||||| || ||||||||||||||||||| Sbjct 13140 TTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAA 13199 Query 1090 TTTTATT 1096 ||||||| Sbjct 13200 TTTTATT 13206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8697668576642