Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_024009.1 Length=2772 Score E Sequences producing significant alignments: (Bits) Value seq19028 524 1e-145 >seq19028 Length=31091 Score = 524 bits (580), Expect = 1e-145 Identities = 772/1088 (71%), Gaps = 34/1088 (3%) Strand=Plus/Plus Query 1594 TGGCTCTGTGAGGGTGATGAATTCTGCATTCTTTATAGCCCAAGACCTTAGTGCTGAGTT 1653 ||| | ||||| |||| |||||||||||| | | || |||| ||| | || Sbjct 13770 TGGTTGTGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATT 13829 Query 1654 CTTTTCCTCGTCTAAGAACTCTTTATAGCTGGAGTTGGGCCCAGGATTGCATAGGAAGAT 1713 |||||||| || | |||||||||||||||||| | || ||||||||||| | |||||| Sbjct 13830 TTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGAT 13889 Query 1714 AGTGGGAATGCCCCCTTTAATTTGAACTGGCTTCCCGTACTTGGTGTTGCTTTGCCAGTC 1773 || || || || || || || | || ||| | ||||| || ||||| ||| | Sbjct 13890 TGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATT 13949 Query 1774 CCTTTGGGCCCCCATGAACTCTTTAAAGTGCTTTAGGTAGTGGGGGTCTACGTCATCAAT 1833 |||||||||||||| |||||||||||||||||||| || || || || |||| |||||| Sbjct 13950 GCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAAT 14009 Query 1834 GACGTTGTACCAGGAGGCATTTGAATAGATTTTAGGGCTCAGATCTAAATGGCCACATAA 1893 || ||| ||||||| ||||||||| |||||| ||| ||||||||| || |||| Sbjct 14010 GATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAG 14069 Query 1894 GTAATTATGTGGTCCCAAAGACCTGGCCCACATAGTCTGGCCCGTACGACTATCACCCTC 1953 ||||||||||||||| ||||| || |||||| |||| || || | | |||||||| Sbjct 14070 GTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTC 14129 Query 1954 GATGACGATACTTTTAGGTC-TCAATGGCCGCGCAGCGGGACCCATCACATTTGCAGAGG 2012 ||||| ||||| || |||| | |||||||||||||||| | || | |||||| ||| | Sbjct 14130 AATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTG 14189 Query 2013 CCCATTCCTCTATGGGCTCTGGAACTTGATCAAAGGAAGAAGAAAGAAAAGGGGAAACAT 2072 |||| ||| || | ||| ||||||||| || |||||| ||||| Sbjct 14190 CCCAGCACTCAATTG----------TTG----AAGGAAGAACAACTAAAAGGACTAACAT 14235 Query 2073 AAACCTCCATTGGA-GGTGCA--AAAATCCTATCTAAATTATTTTTTAAATTATGATATT 2129 || || ||| || ||| || || | |||||| || || ||||||||||| Sbjct 14236 AAGGTTC---AGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATATT 14292 Query 2130 GAAAAATAAAATCTTTAGGGAGTTTCTCCCTAATTATTGCCAGAGCAGCATCAGCGGACC 2189 |||| | ||| | | || | ||| || ||||| || | || || | ||| || Sbjct 14293 GAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATG 14352 Query 2190 CTGAATTCAGAGCTTCTGCAGCAGCATCATTAACTCTCTGTTGACCTCCTCTAGCAGATC 2249 | | | | |||||||||| ||||||| | | ||| ||||||||||||||||| Sbjct 14353 TAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATC 14412 Query 2250 TTCCATCGACCTGAAACTCACCCCAGTCGATGTAATCACCGTCCTTCTCGATGTAGGACT 2309 |||||||| ||||| | ||||||||| ||||||||| ||| ||| ||||||| || Sbjct 14413 GTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCT 14472 Query 2310 TGACATCGGATGAGGACTTAGCTCCCTGGAAATTTGGGTGGAAATGGGAGGAGTTATGAG 2369 | ||||| || || || ||||| ||||| ||||||||| | || | ||| || Sbjct 14473 TAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGGTATGTGGTGCTAGTATTAG 14532 Query 2370 GGTGAGTGACATCGAAATGTCTGGGGTTTCTGAACTGGGCCTTACCCTTGAACTGGATGA 2429 | || ||| |||||| ||||| |||||||| || || ||||| || | ||| || || | Sbjct 14533 GATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAA 14592 Query 2430 GGGCATGGATATGCAGAGACCCATCTTGGTGTTTTTCTTGTGCCACTCGGATAAATAATT 2489 |||||||| |||| | |||||| |||||||||||||| |||| ||| | || Sbjct 14593 GGGCATGGCTATGAAATTCCCCATCCTGGTGTTTTTCTTGACAGACTC--TAAAACAGTT 14650 Query 2490 TATCTGAGGGACAGTGTATGGATTTGATGAGTTCGAGCATTTGCTCTTTTGGAATTGGGC 2549 ||| ||| ||||| | ||| | | | || | ||||| ||||| |||| || | Sbjct 14651 TATTTGAAGGACAAGAAACCTGTTTCAAGTGCTCTAAGATTTGATCTTTAGGAAGAGGAC 14710 Query 2550 ATTTTGGATATGTAAGGAATATGTTTTTGGCTTTAACTTGGAAGGAATTAACACGCGGCA 2609 |||||||| ||||||| ||||||||||| | || || ||||| |||| || | |||| Sbjct 14711 ATTTTGGAAATGTAAGAAATATGTTTTTAGAATTTACCTGGAATGAATGAAGCCTTGGCA 14770 Query 2610 T--------ATTGAATTGGGTGCTCTCGAAACTCTGTGGGAATTGGGGGCTTTGGGTGCC 2661 | | |||| ||||| ||| || ||| | | |||||| |||||||| ||| Sbjct 14771 TTTTGTAGAAATGAAATGGGTACTC-CG--ACTTCCTATGCATTGGGTGCTTTGGGAGCC 14827 Query 2662 CATTTATA 2669 | | |||| Sbjct 14828 CTTATATA 14835 Score = 208 bits (230), Expect = 1e-50 Identities = 367/532 (69%), Gaps = 27/532 (5%) Strand=Plus/Plus Query 966 CATAGTGAGAATGCATTGATGTTGTATATGGCTTGTACTCATGCGAGTAACCCTGTATAT 1025 |||| ||| ||||||||| |||||||| || |||||||| ||| ||||||||| Sbjct 13084 CATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1026 ACCACACTGAAGATACGGATCTATTTTTATGATTCAGTATCGAATTAATAAATTTTAAAT 1085 || ||| | ||| | ||||||||||| ||||| ||||||||||| || ||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 1086 TTTATATCATGATCCTCAATTACATCAATTGTGTCATGGAGTACATCATATAATACA-TG 1144 ||||| ||||||| |||| |||||| | ||| | | | ||||| |||||||| || Sbjct 13201 TTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATTG 13260 Query 1145 TTTAAATGCCCTAATACAATTATTTATACTAATCACTCCTAATCTATCTAAAAACTTTAA 1204 | || | || |||||| ||| || |||||||| || ||||||| |||||||| || | Sbjct 13261 TCTACA-GCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCAT 13319 Query 1205 AACGTGAGTCCTAAATACTCGTAAGAAATGCCCAGTCTGAGGTTGTAAACGAGTGCAGAT 1264 || || ||||||||| ||||||| ||| |||| |||||||||| | ||| Sbjct 13320 TACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGAT 13379 Query 1265 CGTCAAGCCCAAGAAACACTTCATTATCCCCAGTTCCTTCCTGAGGTTGTGATTGAACTG 1324 | | ||| | |||| || | |||||||||||| |||||||| ||||| | Sbjct 13380 CTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCG 13439 Query 1325 GATTCTGATGTGGATGATGTC-GTGGTTCATGTTGAATGGCCTCTGGTCGTGGTTGAGGA 1383 ||| || | ||| ||||| || || | ||| ||| || | | ||||||||||| Sbjct 13440 AATTTGTATTTCGATTATGTCGGTTGTCGAATTTG-TTGGTCTGAGATTGTGGTTGAGGA 13498 Query 1384 TCTTGAAATAGAG-GGGATTTGTTACCTCCCAGATA-------------------TACAC 1423 |||||||||| || | | || ||||| ||| || || Sbjct 13499 TCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGACTAGAC 13558 Query 1424 GCCATTCATTGCCTGAGCTGCAGTGATGGGTTCCCCTGTGCGTGAATCCATG 1475 ||||||||| || || ||||||||| ||||||||||||| ||||||| Sbjct 13559 GCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATG 13610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8755155135965