Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_025265.1 Length=2564 Score E Sequences producing significant alignments: (Bits) Value seq19028 206 4e-50 >seq19028 Length=31091 Score = 206 bits (228), Expect = 4e-50 Identities = 584/882 (66%), Gaps = 42/882 (5%) Strand=Plus/Plus Query 1423 GAATTTAGCATTATGAAGTGTCCACGCTTTTAGAGATGA-ATTTTCATGCTTGTCAAGGA 1481 ||||| |||||||| | | ||| ||||| | | | ||||| | || || |||| Sbjct 13788 GAATTCTGCATTATGCAAAGACCAATTTTTTA-ATTTAATATTTTTTTCCTCCTCGAGGA 13846 Query 1482 ACTCTTTATAACTAGCCCCCTCTCSTGGATTGCAAAGCACGATTGATGGGATTCCTCCTT 1541 |||||||||| || | | |||||||| | | ||||| || || || || | Sbjct 13847 ACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCT 13906 Query 1542 TAATTTGAACTGGCTTTCCGTATTTACAGTTGCTTTGCCAGTCACGTTGGGACCCAATTA 1601 | || | || ||| |||||||||| ||||| ||| | | ||||| ||| || | Sbjct 13907 TTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAA 13966 Query 1602 GCTCTTTCCAGTGTTTCATTTTTAGGTATTGCGGAGTGACATCATCAATGACGTTATATT 1661 |||||| |||| || ||| || |||||| ||| | |||||||| |||||| Sbjct 13967 ACTCTTTAAAGTGCTT------TAGATAATGCGGATCGACGTTATCAATGATGTTATA-- 14018 Query 1662 CCA--CTTCATTTGAATAAACTTTAGAATTAAAGTGTAGATGTCCACTCAAGTAATTATG 1719 ||| | | ||||||||||| |||| ||| || | || ||| || | | ||||||||| Sbjct 14019 CCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATG 14078 Query 1720 TGAACCTAATGCACGGGCCCACCTCGTCTTCCCCGTCCTTGAATCACCCTCAATGATTAT 1779 || ||||| | | |||||| |||||||| || || || ||||||||||||| || Sbjct 14079 TGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAAT 14138 Query 1780 ACTAATAGGTC-TCTCTGGCCGCGCAGCGGCACCCCTTCCGAAATATTCATCAGCCCACT 1838 ||| | |||| | |||||||||||||||| |||| | || |||| | ||||| Sbjct 14139 ACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCT---AACATTTTCAGCTGCCCA-- 14193 Query 1839 CTTGCATCTCGTCAGGCACGTTAGTGAAAGATGAGAGTGGAAACGGAGGAACCCATTGTT 1898 ||| ||| || |||| || || ||| ||| ||| | ||| Sbjct 14194 ---GCA-CTC--------AATTGTTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTT 14241 Query 1899 CAGGAGGCTTATTAAAAATCCTATCTAAATTGGAATTTAAATTATGATATTGAAATAAAT 1958 ||||||| | || || | |||||| || | | || ||||||||||||||||| | Sbjct 14242 CAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATATTGAAATAGAA 14301 Query 1959 ATTTCTCGGGAAGTTTTTCCCTTATTATTTGCATAGCGGATTCTT---TAGAAGGGGCGT 2015 | || | || | |||||| || || | | | ||| | ||||| | || | || Sbjct 14302 ACTTTGCTGGCATTTTTTCTCTAATAA--TAGAAAGC-GCTTCTTCAATTGATGTAGCAC 14358 Query 2016 TTAATGCCTCTGCTGCGGCGTCGTTAGCCGTTTGCTGACCTCCTCTAGCACTTCTACCGT 2075 |||| || ||||| | | || || | || || ||||||||||||| || || | Sbjct 14359 TTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCAT 14418 Query 2076 CGATTTGGAATTCTCCCCATTCAAGAGT-ATCTCCGTCTTTATCGATATAGGACTTGACG 2134 ||||||| || | ||||| || | || ||| | |||||| |||| || ||| || Sbjct 14419 CGATTTGAAAATTGCCCCAGTC-GGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACA 14477 Query 2135 TCGGACGATGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGATCTTGTTGGGGAT 2194 || || ||||||||||| || | ||| || ||| ||||| || | | || |||| Sbjct 14478 TCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTGGTGCTAGTATT-AGGAT 14535 Query 2195 --ACCAGGTCGAAGAATCTATTATTCGTGCATTGGTATTTACCTTCGAATTGGATAAGCA 2252 | | |||||| |||| || | |||| || ||||||||||| ||||| Sbjct 14536 GGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGGG 14595 Query 2253 CGTGGAGATGAGGCTCCCCATTCTCGTGAAGTTCTCTACAGA 2294 | ||| |||| ||||||| || ||| |||| ||||| Sbjct 14596 CATGGCTATGAAATTCCCCATCCTGGTGTTTTTCTTGACAGA 14637 Score = 87.8 bits (96), Expect = 3e-14 Identities = 239/361 (66%), Gaps = 29/361 (8%) Strand=Plus/Plus Query 812 ATTATTGTATATGGCATGTACTCATGCTTCTAATCCCGTGTATGCTACTTTGAAAATTCG 871 ||| |||||||| | |||||||| |||||||| || ||| |||| ||| || || Sbjct 13098 ATTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGTATATTGTACTATGAGAACACG 13157 Query 872 GATCTATTTTTATGATTCGATTACAAATTAATAAAGTTTAAATTTTATTGAATGATTTTC 931 | ||||||||||| | |||||||||||| || ||||||||| ||||| ||| Sbjct 13158 CAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAATTTTATTTCATGATATTC 13217 Query 932 GAGTACA------------TAATTTACATATGATTTGTCTGTTGCGAAACGAACAGCTCT 979 |||||| | | |||||| ||| | | ||| |||||||| Sbjct 13218 AAGTACATCCACTGTTTGCTCAATTACAT-TGAATAATACATTG-----TCTACAGCTCT 13271 Query 980 GATTACATTATTAATTGAAATAACACCTAAACGGTCT--AGATACAATAAGACTAAATAC 1037 || | ||| ||||| |||||||||||| |||||| | || || | || |||| Sbjct 13272 AATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCATTACACGAAAT-- 13329 Query 1038 TTAAAT-CTATTTA-AATATGTCATCCCAGAAGCTCTCAGGGATGTCGTCCAGACTTGGA 1095 |||||| || || | || | || || | || | | | || |||| || | || Sbjct 13330 TTAAATACTCTTAAGAAAACGT-ATGTCGGAGGACGTAAACGA----GTCCTGATCTTGA 13384 Query 1096 AATTTAGAAATGCCTTGTGGAGATCCAACGCTTTCCGCAGTTTGTGGTTGAAACGTATCT 1155 | || || || || ||||| |||| || | |||| ||| ||||||||||| || || | Sbjct 13385 AGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCGAATTT 13444 Query 1156 G 1156 | Sbjct 13445 G 13445 Lambda K H 0.634 0.408 0.913 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8093086244540