Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_025680.1 Length=2763 Score E Sequences producing significant alignments: (Bits) Value seq19028 394 2e-106 >seq19028 Length=31091 Score = 394 bits (436), Expect = 2e-106 Identities = 1035/1567 (66%), Gaps = 97/1567 (6%) Strand=Plus/Plus Query 965 TCATACTGAGAATGCCTTGTTATTGTATATGGCTTGTACTCATGCTTCTAACCCAGTGTA 1024 ||||||||| ||||| ||||| |||||| || |||||||| ||||| || || || Sbjct 13083 TCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGTATA 13139 Query 1025 CGCTACGTTGAAAATACGTATTTATTTTTATGATGCTGTAACAAATTAATAAAAATTAAA 1084 ||| ||| || ||| | |||||||||||| |||| |||||||||||| ||| || Sbjct 13140 TTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAA 13199 Query 1085 TTTTATTTCATGATTTTCAGTTACATCAATTGTTCTTTCAAATACACGAAACAATACATA 1144 |||||||||||||| |||| |||||| | |||| |||| |||| || ||||||| Sbjct 13200 TTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATT 13259 Query 1145 ATCAACTGCTCTGATTACATTGTTAATGGAAATTACACCAAGACTATCTAAATACTTAAT 1204 || || ||||| || | ||||||||| ||| ||||| | | |||||| | || || Sbjct 13260 GTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCAT 13319 Query 1205 AACTTCATATCTAAATACTCTTAAGAAACGACCAGTCTGAGGCTGTAATGTCGTCCAAAT 1264 || | || ||||||||||||||||| ||| |||| |||| |||| || Sbjct 13320 TACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGAT 13379 Query 1265 TCGGAAGTTGAGAAAACATTTGTGAATCCCCATTACCTTCCTGATGTTGTGGTTGAATCT 1324 ||||||||| ||| |||||||| || | ||||||| | |||||||||||||| Sbjct 13380 CTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCG 13439 Query 1325 TATCTGAATGGAAATGATGTCGTGGTTC--ATTAGAAATGGCCTGTGGCTGTGTTCTGTT 1382 || || || || |||||| || ||| | ||| ||| | |||| | Sbjct 13440 AATTTGTATTTCGATTATGTCGGTTGTCGAATTTGT--TGGTCTGAGATTGTGGTTGAGG 13497 Query 1383 ATCTTGAAATATAGGGGATTGTT--TATCTCCCAGATA------------AAA------- 1421 |||||||||||||| | | | ||| ||||| ||| ||| Sbjct 13498 ATCTTGAAATATAGAA-ACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGACTAG 13556 Query 1422 ACGCCATTCTCTGCCTGAGGAGCAATGATGAGTTCCCCTGTGCGTGAATCCATGATTACT 1481 ||||||||| || || ||||| ||||| ||||||||||||| |||||||| | Sbjct 13557 ACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGACCAGA 13616 Query 1482 GCAGTTGAGGTGGAGGTAGTATGAGCAGCCACAGTCTAGGTCTACACGTTTACGCCTTAT 1541 ||| | | | | | ||| || ||||| ||||||| ||| | | || || Sbjct 13617 ACAGCTAATATTTTTGAATATTGAACATCCACAAGGCAGGTCTAGTCGTCTTCTTCTGAT 13676 Query 1542 TGGTTTCTTCTTG-------GCTATCT---TGTGTTGGA---CCTTG------------- 1575 | || |||||||| | ||| | || | | | ||||| Sbjct 13677 TTGTCTCTTCTTGATATCCGGATATGTAAATGAGGTTGCTTTCCTTGTATAATGTCTATG 13736 Query 1576 -----ATTG--ATA------CTTGC--GAACAGTGGCTCGTAGAGGGTGACGAAGGTTGC 1620 |||| ||| | ||| ||| | ||| | || |||| ||| ||| Sbjct 13737 CATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTGTAGAATTCTGC 13796 Query 1621 ATTCTTGAGAGCCCAATTTTTCAAGGAAAAGtttttttCTTCGTCTAGATATTCCCTATA 1680 ||| | | || ||||||||| || || |||||||| || || || | || |||| Sbjct 13797 ATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTATA 13856 Query 1681 TGAGGAGGTAGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCC-CCCTTTAATTTGAA 1739 ||| ||||| || |||||||| | |||||| || || || || ||||||| || | Sbjct 13857 GCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTAC 13916 Query 1740 TGGGCTTCCCGTACTTTGTGTTGCTTTGCCAGTCCCTCTGGGCCCCCATGAATTCCTTGA 1799 || ||||| ||| ||| ||||| ||| | || ||||||||||| || || || | Sbjct 13917 AGGCCTTCC-GTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAA 13975 Query 1800 AGTGCTTTAAATAATGCGGGTCTACGTCATCAATGACGTTGTACCACGCATCATTACTGT 1859 ||||||||| ||||||||| || |||| |||||||| ||| ||||| |||| ||| | Sbjct 13976 AGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAAT 14035 Query 1860 ACACCTTTGGGCTTAGGTCTAGATGTCCACATAAATAATTATGTGGGCCTAGAGACCTGG 1919 | | || | | |||| ||| || |||| ||||||||||| |||| ||| || | Sbjct 14036 AAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTG 14095 Query 1920 CCCACATTGTTTTGCCTGTTCTACTATCACCTTCAATGACAATACCTATGGGTC-TCCAT 1978 ||||| ||| || ||||||||| ||||| ||||||||||||| |||||| | || Sbjct 14096 CCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAAT 14155 Query 1979 GGCCGCGCAGCGGAAGACATGACGTTCTCGGCGACCCACTCTTCAAGTTCATCTGGAACT 2038 ||||||||||||| | | | || || || || |||| |||| | Sbjct 14156 GGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA-------------T 14202 Query 2039 TGATTAAAAGAAGAAGAAAGAAATGGAGAAACATAAACTTCTAAAGGAGGACTAAAAATC 2098 || || || |||||| || ||| ||| ||||||| ||| ||| || | || || Sbjct 14203 TG-TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATATT 14261 Query 2099 CTATCTAAATTTGAATTTAAATTATGAAATTGTAAAATATAGTCCTTTGGGGCCTTCTCT 2158 | |||||| |||| | || ||||||| |||| ||||| | | || ||| || | | Sbjct 14262 CGATCTAATTTTGGAACTATATTATGATATTG--AAATAGAAACTTTGCTGGCATTTTTT 14319 Query 2159 -TTTAAT-ATATTGAGGGCCTC-GGATTTACTGCCTGAATTGAGTGCTTCGGCATATGCG 2215 | |||| ||| || || || | || || | | | | ||||| ||| || | Sbjct 14320 CTCTAATAATAGAAAGCGCTTCTTCAATTGATG-TAGCACTTAACGCTTCTGCAGATACA 14378 Query 2216 TCGTTGGCAGATTGCTGACCTCCTCTAGCTGATCTGCCATCGATTTGGAAAACTCCAAAA 2275 || || | | || |||||||||||| |||| ||||||||||| ||| || | Sbjct 14379 TCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAG 14438 Query 2276 TCAATGAAGTCTCCGTCTTTTTCCACGTAGGTCTTGACATCTGTTGAGCTCTTAGCTGCC 2335 || || | || | |||||| | | ||| |||| ||||||| || ||||| | Sbjct 14439 TCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGAT 14498 Query 2336 TGAATGTTTGGATGGAAATGTGCTGACCTGTTTGGGGAT--ACCAGGTCGAAGAACCGTT 2393 || | |||||| ||| ||||| || | || | |||| | | |||||| | Sbjct 14499 TGGAAGTTTGGGTGG-TATGTGGTG-CTAGTATTAGGATGGATGATATCGAAGTGTCTAG 14556 Query 2394 GGTTCTTACATTGGTATTTGCCTTCGAATTGGATAAGCACATGGAGATGTGGTTCCCCAT 2453 |||| || |||| |||||||||||||| ||||| ||||| ||| |||||||| Sbjct 14557 GGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGGGCATGGCTATGAAATTCCCCAT 14616 Query 2454 TCTCGTG 2460 || ||| Sbjct 14617 CCTGGTG 14623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8729657059822