Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_025681.1 Length=2782 Score E Sequences producing significant alignments: (Bits) Value seq19028 181 2e-42 >seq19028 Length=31091 Score = 181 bits (200), Expect = 2e-42 Identities = 236/325 (73%), Gaps = 1/325 (0%) Strand=Plus/Plus Query 1704 CCTGGATTGCAGAGGAAGATAGTGGGAATTCCACCTTTAATTTGAACTGGCTTTCCGTAT 1763 || |||||||| | |||||| || || || ||||| || || | || ||| |||||||| Sbjct 13870 CCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTAT 13929 Query 1764 TTACAGTTGCTTTGCCAGTCCTTCTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGGTAT 1823 || ||||| ||| | | ||||||||||| || ||||||||||||||||| || Sbjct 13930 TTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAA 13989 Query 1824 TGGGGGTTGACGTCATCAATGACGTTATACCAAGCACTGTTGCTATACACTTTGGGACTC 1883 || || | ||||| |||||||| ||||||||| ||| | || ||| | ||| | || Sbjct 13990 TGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTC 14049 Query 1884 AAGTCCAGGTGTCCACACAAATAATTATGAGGACCTAACGACCGAGCCCATACTGTTTTT 1943 || || | || || || | |||||||| || ||||| || | ||||| |||| || Sbjct 14050 AAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTC 14109 Query 1944 CCTATTCTACTTGGGCCTTCTATAACAATACTAATGGG-CCTATCCGGCCGCGCAGCGGA 2002 ||| ||||| || || || |||||||| |||| | | ||||||||||||| Sbjct 14110 CCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGC 14169 Query 2003 ATCCATGACATTCTCAGCAGCCCAG 2027 |||| | ||||| ||||| |||||| Sbjct 14170 ATCCCTAACATTTTCAGCTGCCCAG 14194 Score = 82.4 bits (90), Expect = 1e-12 Identities = 129/180 (72%), Gaps = 6/180 (3%) Strand=Plus/Plus Query 2111 ATCTAAATTTGAAACTAAATTATGATATTGAAATATAAATTTTTCAGGAAGTTTTTCCCT 2170 |||||| |||| ||||| ||||||||||||||||| ||| ||| | || | |||||| || Sbjct 14264 ATCTAATTTTGGAACTATATTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTCTCT 14323 Query 2171 GATTATTTGTAACGCAGCTTCTT-TATTG--CCTGCATTTAGGGCCTCTGCTGCTGCGTC 2227 || | | || || ||||||| |||| ||| ||| || ||||| | | | || Sbjct 14324 AATAA--TAGAAAGC-GCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATC 14380 Query 2228 ATTAGCAGTCTGCTGGCCTCCTCTAGCAGATCTGCCGTCGACCTGGAATTCTCCCCATTC 2287 ||| | || || |||||||||||||||| || |||| || || | ||||| || Sbjct 14381 ATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTC 14440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8787143280415