Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_026253.1 Length=2661 Score E Sequences producing significant alignments: (Bits) Value seq19028 116 6e-23 >seq19028 Length=31091 Score = 116 bits (128), Expect = 6e-23 Identities = 448/694 (65%), Gaps = 35/694 (5%) Strand=Plus/Plus Query 1566 TTTTCCTCTTTTTCGAGGAAATCTTTATAACTGGCCCCCTCTCCAGGATTGCAGAGCACG 1625 |||||||| | ||||||| |||||||| |||| ||||||||||| | | | Sbjct 13831 TTTTCCTCCT---CGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1626 ATTGATGGGATACCCCCTTTAATTTGAACAGGCTTGCCGTATTTACAATTTGACTG--CC 1683 |||| || || || || || || | |||||| | |||||||| | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACC 13945 Query 1684 AGTCCTTTTGGGCCCCAATCAATTCCTTCCAATGCTTTAGCTTTAGGTATTGGGGACTGA 1743 | | |||||||||| || || || || | |||||||| | | || ||| || Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGAT------AATGCGGATCGA 13999 Query 1744 CGTCATCGATGACGTTATGCTCCACATCGTTGGAGTAGACCCGGGAATTGAAGTCCAGAT 1803 ||| ||| |||| ||||| | ||| || || || | ||| || || | || Sbjct 14000 CGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAAT 14059 Query 1804 GGCCACTCAAGTAATTATGTGGGCCTAAAGCACGAGCCCACATCGTCTTGCCAGTTCTTG 1863 | || | | |||||||||||| ||||||| | |||||| ||||| || ||||| | Sbjct 14060 GACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAG 14119 Query 1864 AACCACCTTCAACTATCAAACTTATGGG-CCTCTCTGGCCGCGCAGCGGAACCCCTCCCA 1922 | |||| |||| | | ||| |||| | | |||||||||||||| | |||| | Sbjct 14120 ACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCT---A 14176 Query 1923 AAATAATCGTCAGCCCACTCTTGCATCTGGTTGGGCACGTTAGTGAATGAGGAAAGGGGA 1982 | || || | ||||| ||| || || || |||| || ||| | Sbjct 14177 ACATTTTCAGCTGCCCA-----GCA-CT-------CA-ATTGTTGAAGGAAGAACAACTA 14222 Query 1983 AATGGAGGGGCCCATGGCTCTGGAGGCTTGATGAAAATCCTGTCCAGGTTACTTGA--TA 2040 || ||| | | || || ||||| ||||| || | || | || | || || Sbjct 14223 AAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTT--TGGAACTA 14280 Query 2041 GGTTGTGATACTGGAAAAGAAACTTTTCCGGCAACTTCTCTTTAATGATTTTCATCGCCT 2100 || ||||| || || ||||||||| | |||| || ||| |||| || | ||| | Sbjct 14281 TATTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTT 14340 Query 2101 CCTCCTTCGACGGCGCATTTAACGCCTCAGCTGCAGCGTCATTAGCTGTCTGTTGACCTC 2160 | || | || | ||| ||||||| || || | | ||||| | ||| ||| ||||| Sbjct 14341 CTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTC 14400 Query 2161 CCCTAGAACTTCTGCCGTCGATCTGAAACTCACCCCATTCGAGGGTGTCTCCGTCCTTGT 2220 | |||| | || || ||||| ||||| | ||||| ||| | || | ||| || Sbjct 14401 CTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCG 14460 Query 2221 CGATGTAGGACTTGACGTCGGAGCTCGATTTAGC 2254 ||||||| ||| || || || |||||||| Sbjct 14461 CGATGTATTTCTTAACATCTGAAGATGATTTAGC 14494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8403374531386