Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_026514.1 Length=2738 Score E Sequences producing significant alignments: (Bits) Value seq19028 237 3e-59 >seq19028 Length=31091 Score = 237 bits (262), Expect = 3e-59 Identities = 276/370 (75%), Gaps = 7/370 (2%) Strand=Plus/Plus Query 1630 ATTTTTGGGCTCATCGAGGAATTCTTTATAAGAGGACTGTGGTCCTGGATTGCAGAGGAA 1689 |||||| ||| |||||||| |||||||| ||| || || |||||||| | ||| Sbjct 13827 ATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAA 13886 Query 1690 GATAGTGGGAATACCACCTTTAATTTGAACTGGTTTCCCGTACTTGATATTGCTTTGCCA 1749 ||| || || || ||||| || || | || || | ||||| || | ||||| ||| Sbjct 13887 GATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCA 13946 Query 1750 GTTGTGCTGGGCCCCCATGAACTCTTTGAAATGTTTCAGATAGTGCGGATCGACGTCATC 1809 ||| ||||||||||| |||||||| || || || ||||| ||||||||||||| ||| Sbjct 13947 ATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATC 14006 Query 1810 AATGACGTTATACCAGGCATTATTGCTGTACACCTTATTTGACAAATCCAAATGGCCACA 1869 ||||| |||||||||||||||||| || | ||||| |||||| ||||| || || Sbjct 14007 AATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCA 14066 Query 1870 CAAATAATTGTGAGGGCCCAATTGCCGGGCCCACATTGTCTTACCTGTCCTACTGGAC-- 1927 | ||||| || || || || | |||||| |||||| ||||| ||| ||| Sbjct 14067 TAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTA---GACTC 14123 Query 1928 -CCCTCAATGACTATACTTTTGGGTC-TTTGTGGCCGCGCAGCGGGACCCATGACATTTT 1985 ||||||||||| ||||| ||||||| || |||||||||||||| | || | ||||||| Sbjct 14124 ACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTT 14183 Query 1986 CAGCTACCCA 1995 ||||| |||| Sbjct 14184 CAGCTGCCCA 14193 Score = 152 bits (168), Expect = 9e-34 Identities = 265/382 (69%), Gaps = 5/382 (1%) Strand=Plus/Plus Query 945 CATACAGAGAATGCTTTGTTGTTGTATATGGCATGTACACATGCTTCAAATCCTGTGTAT 1004 ||||| || ||||| |||| ||||||| | || ||||| || |||||||| ||| Sbjct 13084 CATACTGAAAATGCATTGT---TGTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1005 GCTAGTCTGAAAGTTCGCATATATTTCTATGACAGCGTAAGCAATTAATAAATATTGAAT 1064 || | ||| | |||| ||||| ||||| || ||| |||||||||||||||||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 1065 TTTATTATGTGGTTTTCTTCTACATTGATGGTTCCATCGAGTACATTGTATAATACATAA 1124 |||||| || | ||| ||||| | ||| || | ||||||| ||||||||| Sbjct 13201 TTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATTG 13260 Query 1125 TCCAC-GCTATTAATACAAGTATTTATGCTTATAACTCCTAATGAGTTTAAGCGTTTCAT 1183 || || ||| ||||| | | || || || ||||| |||||| || ||| |||||| Sbjct 13261 TCTACAGCT-CTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCAT 13319 Query 1184 GAAACTGTAATTAAAAACCCTCAAGAACCGAGATGTCGAACTCCTCAATCTCGTCCAGAC 1243 | || | ||||| || || ||||| |||||| | | || | |||| || Sbjct 13320 TACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGAT 13379 Query 1244 CTTGAAGTTCAAATAACATTTGTGAATCCCTAAAGCCTTCCTCAGGTTGTGGTTGAACCT 1303 ||||||||| | || |||||||| | |||||||||||||||||||||| | Sbjct 13380 CTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCG 13439 Query 1304 GATTTGGATGTTCAGTATGTCG 1325 ||||| || | | ||||||| Sbjct 13440 AATTTGTATTTCGATTATGTCG 13461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8649685851872