Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_026760.1 Length=2932 Score E Sequences producing significant alignments: (Bits) Value seq19028 232 1e-57 >seq19028 Length=31091 Score = 232 bits (256), Expect = 1e-57 Identities = 280/377 (74%), Gaps = 3/377 (1%) Strand=Plus/Plus Query 1804 AAAGCCCAATTTTTCAAATTTGAATTCTTCTCTTCGTCCAACCACTCTTTATAACTGCTT 1863 |||| ||||||||| || || ||| || || || || | |||||||||| ||| Sbjct 13804 AAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAA 13863 Query 1864 GTAGGCCCAGGATTGCAGAGGAAGATTGTTGGTATGCC-CCCTTTAACAAGTAGTGGCTT 1922 ||||| ||||||||||| | ||||||||| ||||| || ||||||| | || ||| | Sbjct 13864 GTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATC-TTTACAGGCCT 13922 Query 1923 TCCATACTTCGTATTGCTTTGCCAGTCTCTCTGGGACCCACAGAACTCTTTAAAGTGCTT 1982 ||| || || ||||| ||| | || |||| ||| ||||||||||||||||| Sbjct 13923 TCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTT 13982 Query 1983 CAGATAATGCGGATCGACGTCATCAATGACGTTGTATAACGCATCATTGCTAAACACCTT 2042 ||||||||||||||||||| |||||||| ||| || | |||| ||| | | | || Sbjct 13983 TAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTT 14042 Query 2043 GGGAGAGAGATCAAGATGTCCACATAAGTAATTATGTGGTCCTAAGCTTCTGGCCCACTC 2102 | | ||| | ||| || |||| |||||||||||||||||| ||| |||||||| Sbjct 14043 ATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTC 14102 Query 2103 AGTTTTTCCAGTTCTTGTTTCTCCCTCAATAAAAATACTCTTCGGTC-TTCTTGGCCGCG 2161 || || || ||||| | || |||||||| | ||||||||| |||| || |||||||| Sbjct 14103 TGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCG 14162 Query 2162 CAGCGGGATCACTTACA 2178 |||||| ||| || ||| Sbjct 14163 CAGCGGCATCCCTAACA 14179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9266965447165