Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_026761.1 Length=2756 Score E Sequences producing significant alignments: (Bits) Value seq19028 241 2e-60 >seq19028 Length=31091 Score = 241 bits (266), Expect = 2e-60 Identities = 493/720 (68%), Gaps = 27/720 (4%) Strand=Plus/Plus Query 1609 GCATTCTTTAAAGCCCAATTTTTGAGAGCATTATTCTTCTCTTCATCCAAGAACTCTTTA 1668 ||||| | |||| ||||||||| | | |||| || || || || | |||||||||| Sbjct 13795 GCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTA 13854 Query 1669 TAACTTGAATTAGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGA 1728 || || ||| |||| || |||||||| | |||||| || || || || || || || | Sbjct 13855 TAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTT 13914 Query 1729 ACTGGCTTTCCGTACTTGGTAT-TTGATTG-CCAGTCCCTTTGGGCCCCCATGAATTCCT 1786 || ||| ||||||| || || ||| | | ||| | |||||||||||||| || || | Sbjct 13915 ACAGGCCTTCCGTATTT--TACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTT 13972 Query 1787 TAAAGTGCTTTAGGTAGTGAGGATCTACGTCATCGATGATGTTATACCACGCATCATTGC 1846 ||||||||||||| || || ||||| |||| ||| |||||||||||||| |||| ||| Sbjct 13973 TAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTG 14032 Query 1847 TGTAAACTTTGGGGCTTAGATCTAAATGACCACATAGGTAATTATGAGGCCCTAATGACC 1906 |||| ||| | | |||||||||||| |||||||||||||| || ||||| || | Sbjct 14033 AATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATC 14092 Query 1907 TAGCCCACATCGTTTTACCCGTACGACTGTCTCCCTCAATTACTATACT-TTGAGGCCTC 1965 | |||||| || || || || | | || |||||||| || ||||| ||| | | | Sbjct 14093 TTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTT 14152 Query 1966 AGAGGCCGCGCAGCGGGATCGACAACGTTATCGATGGCCCAAACTTCAAGTTCTTCTGGA 2025 | ||||||||||||| ||| ||| || || ||||| |||| Sbjct 14153 AATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA----------- 14201 Query 2026 ACTTGATCAAAAGAAGAACGAGAAAAAGGAGAAATATAAACATCCATTGGCTCCTGAAAG 2085 ||| | || ||||||| | ||||||| || |||| || || | || Sbjct 14202 --TTG-TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAAT 14258 Query 2086 ATTCTGTCTAGATTTGCATTTAAATTATGAAATTGTAGTACAAAATCTTTAGGAGC-TAG 2144 |||| |||| |||| | || ||||||| |||| | || ||| |||| || | Sbjct 14259 ATTCGATCTAATTTTGGAACTATATTATGATATTGAAATAGAAA--CTTTGCTGGCATTT 14316 Query 2145 TTCCTTTATTACT-CTAAGAGCCTC-TGACTTACTGCCTGCGTTAAGTGCTGCGGCGTAA 2202 || || || || | ||| || || | | || || || | | ||| | || | Sbjct 14317 TTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATG-TAGCACTTAACGCTTCTGCAGAT 14375 Query 2203 GCGTCGTTTGCTGTCTGTTGTCCTCCTCTTGCTGATCTTCCATCGATCTGAAACTCTCCC 2262 | || |||| ||| ||| |||||||| || |||| ||||||||| ||||| | ||| Sbjct 14376 ACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCC 14435 Query 2263 CATTCGAGAGT-GTCCCCGTCCTTGTCGATGTAGGCCTTGACATCTGAGCTTGATTTAGC 2321 || ||| | || || | ||| || ||||||| ||| |||||||| ||||||||| Sbjct 14436 CAGTCG-GTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGC 14494 Score = 150 bits (166), Expect = 3e-33 Identities = 255/369 (69%), Gaps = 3/369 (1%) Strand=Plus/Plus Query 955 GAATCATACTGAAAATGCATTGATGTTGTATATGGCGTGTACTCACGCCTCTAACCCTGT 1014 || ||||||||||||||||||| |||||||| | ||||| || ||||| ||||| Sbjct 13080 GACTCATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1015 GTATGCTACTTTGAAGATACGGATCTATTTTTATGATTCAGTATCAAATTAATAAATATT 1074 ||| |||| ||| | ||| | ||||||||||| |||||||||||||||||||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1075 GAATTTTATTGAATAAGATTGGTCTACATATACAATGTGTTCTAATACATCCCATAATAC 1134 |||||||||| || | ||| ||||| || | || || | ||||| ||||||| Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATAC 13256 Query 1135 ATGATCAACTGCACGAATTACATTATTAATACTGATAATTCCTAAATTATTTAAATATTT 1194 || || || || | ||| | ||| |||||||| |||| ||||| | |||| |||| Sbjct 13257 ATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTT 13316 Query 1195 AAGCACTTGGGTCTTAAAGACCCTTAAGAATTGCCCAGTCGGAGGCTGTGAAGTCATCCA 1254 | || | ||||| || |||||||| |||||||| || || ||| Sbjct 13317 CATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCT 13376 Query 1255 GATTCGGTAGGCTAGAAAACACTTGTGTATCTCCAACGCTTTCCTCAGGTTGTAATTGAA 1314 ||| | || || ||| ||||| | | || | ||||||||||||| ||||| Sbjct 13377 GATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAA 13436 Query 1315 CTGTATTTG 1323 | ||||| Sbjct 13437 TCGAATTTG 13445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8707265121596