Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_026763.1 Length=2737 Score E Sequences producing significant alignments: (Bits) Value seq19028 264 2e-67 >seq19028 Length=31091 Score = 264 bits (292), Expect = 2e-67 Identities = 482/696 (69%), Gaps = 31/696 (4%) Strand=Plus/Plus Query 1585 AATGGCTCTTTGAGGGTGAAAAATTCTGCATTCTTTAATGCCCAGTCTTTTAGTGATGAA 1644 ||||| | | ||| |||| | ||||||||||| | || | ||| | ||||| | | Sbjct 13768 AATGGTTGTGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATA 13827 Query 1645 TTCTTGTCCTCGTCCAAGTACTCTTTATATGATGACGTTGGTCCTGGATTGCATAAGAAG 1704 || || ||||| || | | |||||||||| || || || || |||||||| |||||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1705 ATTGTCGGGATACCGCCTTTAATTTGAATTGGTTTCCCGTATTTCGTGTTGCTTTGCCAG 1764 |||||||| || || || || || | | || | |||||||| ||||| ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAA 13947 Query 1765 TCCCTTTGGGCCCCCATGAATTCTTTGAAATGTTTCAGATAGTGGGGGTCGACGTCATCT 1824 | |||||||||||||| || ||||| || || || ||||| || || ||||||| ||| Sbjct 13948 TTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCA 14007 Query 1825 ATGACGTTATACCATGCGTCGTTGCTGTAGATCTTTGGGCTTAGATCTAGATGTCCGCAC 1884 |||| ||||||||| || | || || || || | | ||||| ||| ||||| Sbjct 14008 ATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCAT 14067 Query 1885 AAATAATTATGTGGGCCTAATGATCGAGCCCACATAGTTTTCCCTGTTCTACTCGCACCC 1944 | ||||||||||| ||||| |||| |||||| || |||||||||||| | ||||| Sbjct 14068 AGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCC 14127 Query 1945 TCTATCACTATACTCACGGGTC-TCCAGGGCCGCGCAGCGGCATCCCTGACGTTTTCCGC 2003 || || || |||||| ||||| | | |||||||||||||||||||| || ||||| || Sbjct 14128 TCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGC 14187 Query 2004 TGCCCAGCATTCAAGTTCTTCTGGAACTTGATCgaaagaagaagaaaggaaaggagaaac 2063 ||||||||| |||| ||| | ||| |||||| || |||||| ||| Sbjct 14188 TGCCCAGCACTCAA-------------TTG-TTGAAGGAAGAACAACTAAAAGGACTAAC 14233 Query 2064 aaaaacctctaaagga-ggtgca--aaaaTCCTATCTAAATTAGCATTTAAATTATGAAA 2120 | || || |||| || ||| || || | |||||| || | | || ||||||| | Sbjct 14234 ATAAGGTTC---AGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATA 14290 Query 2121 TTGTAATACATAATCTTTG--GGTGCTAGTTCTTTGATTACATTAAGAGC--CTCCGACT 2176 ||| ||| | || ||||| || | |||| | || | | ||| || || | | | Sbjct 14291 TTGAAAT--AGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATT 14348 Query 2177 TA-CTTCCACTGTTAAGTGCTGCTGCGTAAGCGTCGTTGGCTGATTGTTGACCCCCTCTT 2235 | | ||| |||| ||| |||| | | || || | || ||| ||| ||||| Sbjct 14349 GATGTAGCAC--TTAA-CGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTA 14405 Query 2236 GCTGATCGTCCGTCGATCTGGAATTCTCCCCATTCG 2271 || |||||||| ||||| || || | ||||| ||| Sbjct 14406 GCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCG 14441 Score = 215 bits (238), Expect = 9e-53 Identities = 284/385 (74%), Gaps = 9/385 (2%) Strand=Plus/Plus Query 958 TCATACTGAGAATGCCTTGTTATTGTATATGGCTTGTACTCATGCCAGTAATCCAGTGTA 1017 ||||||||| ||||| ||||| |||||| || |||||||| |||||| || || Sbjct 13083 TCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGTATA 13139 Query 1018 TGCTACTTTGAAGATCA-GAATCTATTTTTATGATTCTGTTCAAAATTAATAAAGATTGA 1076 | |||| ||| || || | | ||||||||||| ||| ||||||||||| ||||| Sbjct 13140 TTGTACTATGA-GAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGA 13198 Query 1077 ATTTTATTATATTATAATGTGTTACATATTCTGTGTGTTCCAATACATCCCATAATACA- 1135 |||||||| || ||| | ||||| |||| || || | ||||| |||||||| Sbjct 13199 ATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACAT 13258 Query 1136 TGATTACATGCTCTAATTACATTGTTAATACTAATTACACCCAATCTATCTAAATATTTC 1195 || |||| |||||||| | ||||||||||||||| ||||| |||| |||||| ||||| Sbjct 13259 TGTCTACA-GCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTC 13317 Query 1196 A-TACATTGAACCCTAAATACTCTTAAGAAACGCCAGGTCTGAGGATGTAAACGAGTCCA 1254 | |||| ||| ||||||||||||||||| | ||| ||||| |||||||||||| Sbjct 13318 ATTACA-CGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCT 13376 Query 1255 GATTCGGAAGATTAGAAAACATTTGTGTATCCCCAACGCTTTCCTCAGGTTGTGATTGAA 1314 ||| |||| | || ||| |||||| | || | |||||||||||||| ||||| Sbjct 13377 GATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAA 13436 Query 1315 CTGGACCTGGACTTCTATGATGTCG 1339 | | || | ||| || |||||| Sbjct 13437 TCGAATTTGTATTTCGATTATGTCG 13461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8646487003554