Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_028140.1 Length=2624 Score E Sequences producing significant alignments: (Bits) Value seq19028 105 1e-19 >seq19028 Length=31091 Score = 105 bits (116), Expect = 1e-19 Identities = 235/351 (67%), Gaps = 10/351 (3%) Strand=Plus/Plus Query 1521 TTTTCCTCTTTGTCGAGGAAATCTTTATAACTGGCCCCCTCGCCTGGATTGCAGAGCACG 1580 |||||||| | ||||||| |||||||| |||| || |||||||| | | | Sbjct 13831 TTTTCCTCCT---CGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1581 ATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTTCCATATTTACAGTTGCTTTGCCAG 1640 |||| || ||||| || || || | || ||| |||| ||||| ||||| ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAA 13947 Query 1641 TCCCGTTGGGCCCCAATGAGCTCTTTCCAATGTTTCATCTTTTTATGGGGCGGGCTGACG 1700 | | ||||||||| || | |||||| | || |||| || |||| |||| Sbjct 13948 TTGCTTTGGGCCCCCATAAACTCTTTAAAGTG------CTTTAGATAATGCGGATCGACG 14001 Query 1701 TCATCGATGACGTTGTATTGGGCCTCGTTTGAGTAGACTCTTGGGTTGAAGTCCAGATGC 1760 | ||| |||| ||| || ||| | ||||| || | | | || || || | ||| Sbjct 14002 TTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGA 14061 Query 1761 CCGCTTAGATAATTATGTGGGCCCAATGCACGAGCCCACATCGTCTTCCCCGTCCGACTA 1820 |||| ||| ||||||||||| || || | | |||||| |||||||| || | | Sbjct 14062 CCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGAC 14121 Query 1821 TCACCTTCAACTATGATACTAATAGGTCTGTCA-GGCCGCGCAGCGGGATC 1870 ||||| |||| | ||||| | |||| | | ||||||||||||| ||| Sbjct 14122 TCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATC 14172 Score = 77.0 bits (84), Expect = 5e-11 Identities = 144/212 (68%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 1998 TTGTGATATTGAAAGAGAAACTTTTCCGGCAGCTTCTCTTTGATTATTTGCATCGCCTGA 2057 || ||||||||||| ||||||||| | |||| || ||| | || || | ||| | Sbjct 14283 TTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCT 14342 Query 2058 TCTTTTGAGGAGGCGTTTAGTGCCTCGGCGGCAGCGTCATTAGCCGTCTGTTGACCTCCT 2117 || |||| | || ||| || || || | | ||||| | || ||| ||||||| Sbjct 14343 TCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCT 14402 Query 2118 CTAGCACTTCTACCGTCGACCTGGAATTCACCCCATTCGAGGGTGTCACCGTCCTTGTCG 2177 |||||| || || |||| || || | ||||| ||| | |||| ||| || || Sbjct 14403 CTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCG 14462 Query 2178 ATATAGGACTTGACGTCTGACGATGATTTAGC 2209 || || ||| || ||||| ||||||||||| Sbjct 14463 ATGTATTTCTTAACATCTGAAGATGATTTAGC 14494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8285017143620