Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_028142.1 Length=2668 Score E Sequences producing significant alignments: (Bits) Value seq19028 123 4e-25 >seq19028 Length=31091 Score = 123 bits (136), Expect = 4e-25 Identities = 240/352 (68%), Gaps = 12/352 (3%) Strand=Plus/Plus Query 1566 TTTTCCTCTTTGTCGAGGAAATCTTTATAGCTGGCCCCCTCTCCTGGATTGCAGAGCACG 1625 |||||||| | ||||||| ||||||||||||| || |||||||| | | | Sbjct 13831 TTTTCCTCCT---CGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1626 ATTGATGGGATTCCGCCTTTAATTTGAACTGGCTTTCCGTATTTGCAGTTGCTTTGCCAG 1685 |||| || || || || || || | || ||| |||||||||| ||||| ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAA 13947 Query 1686 TCCCTTTGGGCCCCCATCAATTCCTTCCAGTGCTTCAACTTTAGGTATTGCGGTGTGACA 1745 | |||||||||||||| || || || |||| |||||| || ||||| ||| Sbjct 13948 TTGCTTTGGGCCCCCATAAACTCTTTAAAGTG------CTTTAGATAATGCGGATCGACG 14001 Query 1746 TCATCGATGACGTTATACTCCGCATCGTTTGAGTATACCCTTGGGTTGAAGTCCAGATGT 1805 | ||| |||| ||||||| |||| ||||| || | | || || || | ||| Sbjct 14002 TTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGA 14061 Query 1806 CCGCTTAGATAGTTATGCGGGCCTAATGCACGAGCCCACATCGTTTTACCCGTTCGACTA 1865 |||| ||| || ||||| || ||||| | | |||||| || || || |||| | Sbjct 14062 CCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGAC 14121 Query 1866 TCACCCTCAACAATCAAACTAATAGGTCTGTT--GGGCCGCGCAGCGGGATC 1915 |||||||||| | | ||| | |||| ||| ||||||||||||| ||| Sbjct 14122 TCACCCTCAATGACAATACTCTTGGGTC-GTTAATGGCCGCGCAGCGGCATC 14172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8425766469612