Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_028989.1 Length=2742 Score E Sequences producing significant alignments: (Bits) Value seq19028 280 3e-72 >seq19028 Length=31091 Score = 280 bits (310), Expect = 3e-72 Identities = 295/386 (76%), Gaps = 4/386 (1%) Strand=Plus/Plus Query 1605 TGCATTCTTTACAGCCCAATTTTTAAGTGCGGTATTCTTGTCCTCTTGCAAGAACTCTTT 1664 |||||| | | || ||||||||| | | |||| || ||||| | | ||||||||| Sbjct 13794 TGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTT 13853 Query 1665 ATAGCTGGAATGTGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTG 1724 |||||||||| || || |||||||| | |||||| || || || || || || || | Sbjct 13854 ATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTT 13913 Query 1725 AACTGGTTTACCGTACTTGGTGTTGCTTTGCCAGTCTCTTTGGGCCCCCATGAATTCTTT 1784 || || | ||||| || ||||| ||| | |||||||||||||| || ||||| Sbjct 13914 TACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTT 13973 Query 1785 AAAGTGCTTTAGATAATGCGGGTCGACGTCATCAATGACGTTATACCAAGCAGCATTACT 1844 ||||||||||||||||||||| ||||||| |||||||| ||||||||| ||| ||| Sbjct 13974 AAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGA 14033 Query 1845 GTACACTTTTGGACTTAAATCTAAATGACCGCATAAGTAATTATGTGGTCCTAATGTCCT 1904 || | ||| | | ||||||||||||||||||| |||||||||||||||||| | || Sbjct 14034 ATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCT 14093 Query 1905 GGCCCACATTGTCTTCCCCGTCCTGCTATCACCCTCTATCACTATACTTATCGGTC-TTA 1963 |||||| ||||||||| || || |||||||| || || ||||| | |||| ||| Sbjct 14094 TGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTA 14153 Query 1964 ATGGCCGCGCAGCGGCA---CTAACA 1986 ||||||||||||||||| |||||| Sbjct 14154 ATGGCCGCGCAGCGGCATCCCTAACA 14179 Score = 156 bits (172), Expect = 7e-35 Identities = 273/386 (71%), Gaps = 11/386 (3%) Strand=Plus/Plus Query 955 TCATACGGAGAATGCCCTTTTATTGTACATGGCATGTACTCATGCTAGTAATCCAGTGTA 1014 |||||| || ||||| || ||||| || | |||||||| |||||| || || Sbjct 13083 TCATACTGAAAATGCA---TTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGTATA 13139 Query 1015 TGCTACCTTGAAGATCA-GAATCTATTTCTATGATTCGGTTCAAAATTAATAAACATTGA 1073 | ||| ||| || || | | ||||| ||||| || ||||||||||| ||||| Sbjct 13140 TTGTACTATGA-GAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGA 13198 Query 1074 ATTTTATTATATGTGAAACATGAGCATCAATTGTGCCCTCGAACACATTGTACAGAACAT 1133 |||||||| ||| | || | |||| | ||| ||| | |||||| | | |||| Sbjct 13199 ATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACAT 13258 Query 1134 GTGT-AATTGCTCTAATTACATTGTTGATACTAATCACGCCTAAATGGTCTAAATACTTC 1192 ||| | |||||||| | |||||| |||||||| || ||||| |||||||| | ||| Sbjct 13259 -TGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTC 13317 Query 1193 A-TACATTGATATCTAAATAGTCTTAAGAAACGCCAGGTCTGAGGACGTAAACGAGTCCA 1251 | |||| || || |||||| |||||||||| | ||| |||||||||||||||||| Sbjct 13318 ATTACA-CGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCT 13376 Query 1252 GATTTGGCAGATTA-GATAGCATTGGTGTAGTTCCAACGCTCTCCTCAGGTTGTAGTTGA 1310 ||| | | || | | || ||| || ||| || | || | |||||||||||| ||||| Sbjct 13377 GATCTTGAAGTTGAGGAAAGC-TTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGA 13435 Query 1311 ACTGGATCTGCACGGTGATTATGTCG 1336 | | || || | |||||||||| Sbjct 13436 ATCGAATTTGTATTTCGATTATGTCG 13461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8662481245144