Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_029105.1 Length=2700 Score E Sequences producing significant alignments: (Bits) Value seq19028 136 7e-29 >seq19028 Length=31091 Score = 136 bits (150), Expect = 7e-29 Identities = 234/339 (69%), Gaps = 7/339 (2%) Strand=Plus/Plus Query 1611 TCGAGGAAATCTTTATAACTAGCCCCCTCGCCTGGATTGCACAGCACGATTGAAGGAACC 1670 |||||||| |||||||| || | || |||||||||| | ||||| || | | Sbjct 13840 TCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATC 13899 Query 1671 CCGCCTTTAATTTGAACAGGCTTTCCGTACTTGCAATTGGATTGCCAGTCCCTTTGGGCC 1730 || || || || | |||||| ||||||| || ||| ||| | ||||||||| Sbjct 13900 CCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCC 13959 Query 1731 CCGATAAGTTCCTTCCAGTGCTTTAGCTTTAGATAATGCGGGCTTACATCATCAATGACG 1790 || |||| || || ||||||| |||||||||||| || | |||||||| | Sbjct 13960 CCCATAAACTCTTTAAAGTGCTT------TAGATAATGCGGATCGACGTTATCAATGATG 14013 Query 1791 TTATACTCCACATTGTTCGAGTAAACCCTAGAATTGAAGTCTAGGTGCCCGCTCAAATAA 1850 |||||| |||| || || |||| || ||| || |||| || |||| | ||| Sbjct 14014 TTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAA 14073 Query 1851 TTATGTGGGCCTAACGCTCGAGCCCACATCGTCTTTCCCGTTCGAGAATCCCCCTCGATG 1910 |||||||| ||||| | || |||||| ||||| || |||| ||| || ||||| ||| Sbjct 14074 TTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATG 14133 Query 1911 ATCAAGCTAACAGGTCG-AACAGGCCGCGCAGCGGCATC 1948 | | || ||||| | ||||||||||||||||| Sbjct 14134 ACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATC 14172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8528129615788