Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_029117.1 Length=2965 Score E Sequences producing significant alignments: (Bits) Value seq19028 201 2e-48 >seq19028 Length=31091 Score = 201 bits (222), Expect = 2e-48 Identities = 321/460 (70%), Gaps = 2/460 (0%) Strand=Plus/Plus Query 2347 TTATGGTATTTGAATAGAAAATCGTGAGGCAGTTTCTCACGAATAATTGCCAACGCCGCT 2406 ||||| |||| |||||||| | |||| ||| || | |||||| | | ||| || Sbjct 14283 TTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCT 14342 Query 2407 TCCGCCGATGCTGCGTTTAGTGCTTCTGCAGATGCATCATTAACCGTCTGTTGACCTCCT 2466 || |||| || ||| |||||||||||| ||||||| || ||| ||||||| Sbjct 14343 TCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCT 14402 Query 2467 CTTGCAGATCGACCATCGATTTGAAATTGACCCCAGTCGAGGTAATCTCCGTCTTTTTCG 2526 || |||||||| |||||||||||||| | ||||||||| |||||| | |||||| || Sbjct 14403 CTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCG 14462 Query 2527 ATATAGGACTTGACGTCGGAGCTAGATTTAGCTCCCTGGATATTTGGGTGGAAGCTTCTA 2586 || || ||| || || || |||||||| |||| ||||||||| | | | Sbjct 14463 ATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGGTATGTGGTG 14522 Query 2587 CTGGCACTTGGATGCCGTAAATCGAAGTGACGGGGGTTACAGATTTGTACTTTTCCTTCG 2646 || | | | ||||| | ||||||||| | ||||| | | |||| | || |||||| Sbjct 14523 CTAGTATTAGGATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCTTGCCTTCG 14582 Query 2647 AATTGGATAAGCACATGGAGATGAGGTTCCCCATTCTCGTGTAGTTCTCTTGAGATACGG 2706 ||||| ||||| ||||| |||| |||||||| || |||| || |||||| | || Sbjct 14583 AATTGAATAAGGGCATGGCTATGAAATTCCCCATCCTGGTGT--TTTTCTTGACAGACTC 14640 Query 2707 ATGAATTTCTTGTTAGATGGACAGGCGAGGTTCTGCAGCTGCTCTAAGGCTTCGTCCTTG 2766 || || || || ||||| | | | | || ||||||||| || || || Sbjct 14641 TAAAACAGTTTATTTGAAGGACAAGAAACCTGTTTCAAGTGCTCTAAGATTTGATCTTTA 14700 Query 2767 GAGAGAGTACAGTGTGGAAAAGTAAGAAAGATGTTTTTAG 2806 | |||| ||| | |||||| |||||||| |||||||||| Sbjct 14701 GGAAGAGGACATTTTGGAAATGTAAGAAATATGTTTTTAG 14740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9372526323850