Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_029908.1 Length=2610 Score E Sequences producing significant alignments: (Bits) Value seq19028 141 2e-30 >seq19028 Length=31091 Score = 141 bits (156), Expect = 2e-30 Identities = 278/408 (68%), Gaps = 11/408 (3%) Strand=Plus/Plus Query 1446 TGTGAGGGTGATGAAGACTGCATTCTTTAATGTCCAGTTTTTGAGGGATGCATTTTCCTC 1505 ||||| |||| ||| ||||||| | || | ||| ||||| | ||||| || Sbjct 13776 TGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTC 13835 Query 1506 TTTGTTGAGGAAATCTTTATAGCTTGCACCCTCACCAGGATTGCAAAGCACGATTGCTGG 1565 | | |||||| ||||||||||| | | |||||||||||| | | ||||| || Sbjct 13836 CTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGG 13895 Query 1566 GATCCCACCTTTAATTTGAACTGGCTTGCCGTATTTGCAATTGGACTG--CCAGTCTTTT 1623 |||||||| || || | || ||| | |||||||| ||| ||| ||| | || Sbjct 13896 TATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTG--CTGGACCAATTGCTT 13953 Query 1624 TGTGCTCCCAGCAGCTCTTTCCAGTGCTTTAGCTTTAAATAGTGCGGTGCGACATCATCA 1683 || || |||| | |||||| |||||||||| ||| ||||| |||| | |||| Sbjct 13954 TGGGCCCCCATAAACTCTTTAAAGTGCTTTAG------ATAATGCGGATCGACGTTATCA 14007 Query 1684 ATGACGTTATACTCCACTTCATTCGAAAAGACTCGAGCATTGAAGTCCAGATGTCCACTG 1743 |||| ||||||| | | ||| ||| | | | | ||| || || | ||| || | Sbjct 14008 ATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCAT 14067 Query 1744 AGATAGTTATGTGGGCCTAACGCACGTGCCCACATTGTCTTCCCTGTCCTTGAATCACCT 1803 || || |||||||| ||||| | | ||||||| |||||||||||| || || ||||| Sbjct 14068 AGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCC 14127 Query 1804 TCGACTATGAGACTTACTGGTC-TTTCCGGCCGCGCAGCGGAACCCCT 1850 || | | | ||| |||| || ||||||||||||| | |||| Sbjct 14128 TCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCT 14175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8240233267168