Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_030403.1 Length=2742 Score E Sequences producing significant alignments: (Bits) Value seq19028 185 2e-43 >seq19028 Length=31091 Score = 185 bits (204), Expect = 2e-43 Identities = 257/359 (72%), Gaps = 1/359 (0%) Strand=Plus/Plus Query 1653 ATTCTTTTCTTCGTCCAAGAAATCTTTATACGAGGACGTCGACCCAGGATTGCACAGGAA 1712 ||| ||||| || || | ||| |||||||| ||| || | ||||||||||||| ||| Sbjct 13827 ATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAA 13886 Query 1713 GATAGTGGGAATTCCGCCTTTAATTTGAATCGGCTTTCCGTACTTTGTGTTGCTTTGCCA 1772 ||| || || || || || || || | | ||| ||||||| ||| ||||| ||| Sbjct 13887 GATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCA 13946 Query 1773 GTCCCGCTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGATAGTGCGGGTCGACGTCATC 1832 | | ||||||||||| || || ||||||||||||||||| ||||| ||||||| ||| Sbjct 13947 ATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATC 14006 Query 1833 AATGACGTTATACCATGCTTCGTTACTGTACACCTTTGGGCTTAGGTCCAAATGACCGCA 1892 ||||| ||||||||| || | || || | || | | || ||||||||||| Sbjct 14007 AATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCA 14066 Query 1893 CAGATAATTGTGCGGACCCAACGAACGGGCCCAACAAGTTTTGCCCGTCCTACTATCCCC 1952 || ||||| || || || || || | ||||| || || || || ||| || || Sbjct 14067 TAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACC 14126 Query 1953 CTCTATTACTATACTATTGGG-CCTAAAAGGCCGCGCAGCTGCAGGCTTGACGTTTTCA 2010 ||| || || ||||| ||||| | | || ||||||||||| ||| | | || |||||| Sbjct 14127 CTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCA 14185 Score = 165 bits (182), Expect = 1e-37 Identities = 268/385 (70%), Gaps = 3/385 (1%) Strand=Plus/Plus Query 964 GAATCACACGGAGAATGCTTTGCTTTTGTATATGGCGTGTACTCACGCCTCTAACCCTGT 1023 || ||| || || ||||| ||| |||||||| | ||||| || ||||| ||||| Sbjct 13080 GACTCATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1024 GTATGCAAGTTTGAAGATACGGATGTATTTTTATGATTCCGTGTTAAATTAATAAAGCTT 1083 ||| | | ||| | ||| | ||||||||||| || | ||||||||||| || Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1084 GAATTTTATATCATGTTTGTCAATTACATCAATCGTCCCGTCTAGGACGTCAAACAGTAC 1143 ||||||||| ||||| | |||| |||||| | || || | || | || | ||| Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATAC 13256 Query 1144 ATGAGCGACAGCTCTAACGACAAAATTAATGGAAATTACACCGACCATATCTAGGTATTT 1203 || | |||||||||| | | ||||| ||| ||||| | |||| |||| Sbjct 13257 ATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTT 13316 Query 1204 CACAACCTGAGTCCTAAAGACTTTTAAGAAAAGACCAGTCGGAGGACGTAAGGTCGTCCA 1263 || || || |||| ||| ||||||||| |||||||||||||| |||| Sbjct 13317 CATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCT 13376 Query 1264 GACTTTGAAGTTCAGAAAACACTTGTGAATCCCCAGTTCCTTCCTCAGGTTGTGGTTGAA 1323 || |||||||| || ||| ||||||| ||||||||||||||||||||||||||| Sbjct 13377 GATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAA 13436 Query 1324 CCGGATTTGAATTGATATTATGTCG 1348 || ||||| ||| ||||||||| Sbjct 13437 TCGAATTTGTATTTCGATTATGTCG 13461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8662481245144