Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_030699.1 Length=2759 Score E Sequences producing significant alignments: (Bits) Value seq19028 293 4e-76 >seq19028 Length=31091 Score = 293 bits (324), Expect = 4e-76 Identities = 581/848 (69%), Gaps = 33/848 (4%) Strand=Plus/Plus Query 1600 GGTGAAGAATTCTGCATTTTTCAGAGCCCACTCTTTTAAAGCTGAGTGCTTGTCCTCGTC 1659 |||| ||||||||||||| | || || ||| | |||||| | || ||||| || Sbjct 13782 GGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTC 13841 Query 1660 CAAGTACTCTTTATATGATGATGTTGGCCCTGGATTGCATAGGAAGATAGTGGGAATACC 1719 | | |||||||||| || || || || |||||||| | |||||| || || || || Sbjct 13842 GAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCC 13901 Query 1720 TCCTTTAATTTGAATTGGTTTCCCGTATTTTGTGTTGCTCTGCCAGTCTCTTTGGGCCCC 1779 || || || | | || | ||||||||| ||||| ||| | ||||||||||| Sbjct 13902 ACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCC 13961 Query 1780 CATGAATTCTTTAAAGTGCTTTAGATAATGCGGGTCTACGTCATCAACCACGTTATACCA 1839 ||| || |||||||||||||||||||||||||| || |||| ||||| | ||||||||| Sbjct 13962 CATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCA 14021 Query 1840 CGCATCATTGCTGTATACCTTT--GGACTCAAATCTAGGTGTCCACATAGGTAATTATGG 1897 |||| ||| || ||| ||| | ||||||||| || || |||||||||||||| Sbjct 14022 GGCATTATT--TGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGT 14079 Query 1898 GGCCCTAATGACCTGGCCCACATGGTCTTCCCTGTCCGACTCTCACCCTCTATGACAATA 1957 || ||||| || || |||||| ||||||||||| | | ||||||||| ||||||||| Sbjct 14080 GGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATA 14139 Query 1958 CTCATGGGTC-TCCAAGGCCGCGCAGCGGCAACCCTTACATTTTCAGAAACCCAACACTC 2016 ||| |||||| | | ||||||||||||||| |||| |||||||||| |||| ||||| Sbjct 14140 CTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTC 14199 Query 2017 TAGTTGTTCTGGAACTTGATTAAAAGAAGATGAAAGAAAAGGACATTTAAATACCTCTAA 2076 | ||| || || ||||| || |||||||| | | ||| | | Sbjct 14200 -AATTG-------------TTGAAGGAAGAACAACTAAAAGGAC--TAACATAAGGTTCA 14243 Query 2077 TGGAGGTGCA--AAAATTCTATCTAAATTGGCATTTAAATTATGAAACTGTAAAACATAA 2134 | || ||| || |||| |||||| || | | || ||||||| | || ||| | || Sbjct 14244 GGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATATTG--AAATAGAA 14301 Query 2135 TCCTT--TGGAGCTAATTCCTTAATCACATTAAGAGCGTC-TGACTTACTTCCGCTGTTA 2191 | || ||| | ||| |||| | | ||| || || | | || | || ||| Sbjct 14302 ACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATGTAGCACTTA 14361 Query 2192 ATCGCCTTGGCGTAAGCGTCATTTGCGGATTGTTGACCCCCTCGTGCAGATCGTCCGTCG 2251 | ||| | || | | ||||||| | ||| ||| |||| ||||||||||| ||| Sbjct 14362 A-CGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCG 14420 Query 2252 ATCTGAAACTCTCCCCATTCGAGGGTGTCTCCGTCCTTATCCAAATATGACTTAACGTCG 2311 || ||||| | ||||| ||| | || | ||| || | | ||| |||||| || Sbjct 14421 ATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCT 14480 Query 2312 GAACTTGACTTAGCTCCCTGAATGTTCGGATGGAAATGTGTTGACCTGCTTGGGGA--GA 2369 ||| ||| ||||| || | ||| || ||| ||||| || | | | ||| || Sbjct 14481 GAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTGGTG-CTAGTATTAGGATGGA 14538 Query 2370 CCAGGTCGAAGAATCTGTTATTTGTGCATTGGTATTTGCCTTCGAATTGCACAAGCACAT 2429 | |||||| ||| ||| | |||| |||||||||||||| | ||| ||| Sbjct 14539 TGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGGGCAT 14598 Query 2430 GGAGATGA 2437 || |||| Sbjct 14599 GGCTATGA 14606 Score = 143 bits (158), Expect = 5e-31 Identities = 270/391 (69%), Gaps = 11/391 (3%) Strand=Plus/Plus Query 960 CATACGGAAAATGCTTTGTTATTGTATATGGCCTGTACACATGCCAGTAATCCTGTGTAT 1019 ||||| |||||||| ||||| |||||| | || ||||| ||||||||| ||| Sbjct 13084 CATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1020 GCAACCTTGAAAATCAGGATCTATTTTTATGATTCTGTTGCGAATTAATAAATATTATAT 1079 || ||| || | | ||||||||||| ||| | |||||||||||||| || Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 1080 TTTATTATATG--AGTCAATTGAACATCAATTGTCCCTTCAAATACATCGTACATAACAT 1137 |||||| ||| | |||| | ||||| | ||| |||| ||||| | | | |||| Sbjct 13201 TTTATTTCATGATATTCAA--GTACATCCACTGTTTGCTCAATTACATTGAATAATACAT 13258 Query 1138 TTGAAATTGCTCTAATTACATTATTCAAACTAATAATCCCCACGTTGTCTAAATATTTCA 1197 | | |||||||| | ||| || | |||||||| || | ||||||| |||||| Sbjct 13259 TGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCA 13318 Query 1198 -TACATTGATATTTAAATACTCTTAAGAAACGCCCAGTCTGAGGTTGTAAACGAGTCCAG 1256 |||| || |||||||||||||||||||| ||| |||| |||||||||||| | Sbjct 13319 TTACA-CGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTG 13377 Query 1257 ATTCGGCAGATCAGAAAACATTGGTGTATCCCCAATGCTTTCCTCAGGTTGTAATTGAAC 1316 || | || | || ||| || ||| | || | | ||||||||||||| ||||| Sbjct 13378 ATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAAT 13437 Query 1317 TGGACTTGGAGAGTGATGATGTCGAAGTTGT 1347 | | ||| | ||| |||||| ||||| Sbjct 13438 CGAATTTGTATTTCGATTATGTCG--GTTGT 13466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8716861666550