Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_030700.1 Length=2837 Score E Sequences producing significant alignments: (Bits) Value seq19028 286 6e-74 >seq19028 Length=31091 Score = 286 bits (316), Expect = 6e-74 Identities = 602/893 (67%), Gaps = 33/893 (4%) Strand=Plus/Plus Query 1759 CCTGGATTGCAGAGGAAGATAGTGGGAATTCCACCTTTAATTTGAACTGGCTTCCCGTAT 1818 || |||||||| | |||||| || || || ||||| || || | || ||| | |||||| Sbjct 13870 CCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTAT 13929 Query 1819 TT-ACAGT--TGGATTGCCAGTCCTTCTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGG 1875 || || | |||| | | | ||| ||||||||||| || ||||||||||||||||| Sbjct 13930 TTTACCTTGCTGGAC--CAATTGCTT-TGGGCCCCCATAAACTCTTTAAAGTGCTTTAGA 13986 Query 1876 TATTGGGGGTTGACGTCATCAATGACGTTATACCAAGCACTGTTGCTGTACACTTTAGGG 1935 || || || | ||||| |||||||| ||||||||| ||| | || || | |||| Sbjct 13987 TAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTA 14046 Query 1936 CTTAGATCTAAATGCCCACACAAATAATTGTGAGGGCCTAAAGACCTGGCCCATACTGTT 1995 | | ||||||||| || || | ||||| || || |||||||| || ||||| |||| Sbjct 14047 TTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTC 14106 Query 1996 TTGCCTATTCTGCTTGGGCCTTCAATAACAATGGATATGGGTC-TATCTGGCCGCGCAGC 2054 || ||| |||| || ||||| ||||| |||||| | |||||||||||| Sbjct 14107 TTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGC 14166 Query 2055 GGAATCCATGACATTTTCAGCGGCCCAGTCGCTGATAATGTCAGGGACGGCATTGAAAGA 2114 || |||| | ||||||||||| |||||| | || | | || ||||| || Sbjct 14167 GGCATCCCTAACATTTTCAGCTGCCCAG-CACTCA-ATTG------------TTGAAGGA 14212 Query 2115 AGAACNNNNNNNNNNNNNNNNNTATACAGAAGGAGGTGGAGAAAAAATCCTATCTAAATT 2174 ||||| || |||||| || || || | |||||| || Sbjct 14213 AGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTT 14272 Query 2175 AGAAACTAAATTATGATATTGGAAAATAAATTTCTCAGGGAGTTTCTCTCTGATTATTTG 2234 | ||||| |||||||||||| || | ||| || | || | ||| ||||| || || Sbjct 14273 TGGAACTATATTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGA 14332 Query 2235 TAACGCAGCTTCTTTTGAACCTGCGTTCAGTGCCTCTGCGGCAGCGTCGTTAGCAGTCTG 2294 | ||| |||| |||| || | | || ||||| | | || || | || || Sbjct 14333 AAGCGCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATG 14392 Query 2295 CTGACCTCCTCTAGCAGATCTGCCGTCGACCTGGAATTCACCCCAGTCGATGAAATCTCC 2354 ||||||||||||||||| || |||| || || | ||||||||| || |||| | Sbjct 14393 TGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACA 14452 Query 2355 GTCCTTCTCGATGTATGACTTGACATCTGAGGAGGACTTTGCTGCCTGGAAATTTGGATG 2414 ||| ||| |||||||| ||| |||||||| || || || || | ||||| ||||| || Sbjct 14453 GTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTG 14512 Query 2415 GAAT----TGGGAGGAGTTGTGTGGATGTTGTAGGTCGAAATGTCGTGGGTTTTTGAATT 2470 | || || || | | | |||||| | ||||| |||| |||||| | |||| Sbjct 14513 GTATGTGGTGCTAGTATTAGGATGGATG----ATATCGAAGTGTCTAGGGTTTCTAAATT 14568 Query 2471 CTGCTTTCCCCCTGAACTGGATGAGCACATGGAGATGCAGAGCCCCATCTCGGTGTTTCT 2530 ||| || || ||| || || || ||||| ||| | ||||||| ||||||| | Sbjct 14569 GTGCCTTGCCTTCGAATTGAATAAGGGCATGGCTATGAAATTCCCCATCCTGGTGTTTTT 14628 Query 2531 CCTGACTAACTCTGATAAATAGTTTATCAGATGGACAATGAATTGCCCTTAATTGTTC-A 2589 | |||| ||||| ||| ||||||| || |||||| || | || || || | Sbjct 14629 CTTGACAGACTCT--AAAACAGTTTATTTGAAGGACAAGAAACCTGTTTCAAGTGCTCTA 14686 Query 2590 AGAGCTTGCTCTTTAGAGAGAGAGCATTGGGGATAAGTTaaaaaaaTGTTTTT 2642 ||| ||| ||||||| |||| |||| ||| | || | ||| |||||||| Sbjct 14687 AGA-TTTGATCTTTAGGAAGAGGACATTTTGGAAATGTAAGAAATATGTTTTT 14738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8963078074890