Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_030748.1 Length=2742 Score E Sequences producing significant alignments: (Bits) Value seq19028 266 6e-68 >seq19028 Length=31091 Score = 266 bits (294), Expect = 6e-68 Identities = 295/391 (75%), Gaps = 7/391 (2%) Strand=Plus/Plus Query 1614 AGCCCAATTTTTGAGTGCGATGTTCTTTTCCTCGTCTAAGTACTCTTTATAGCTCGAATT 1673 || ||||||||| | | || || |||||||| || | | ||||||||||||| ||| | Sbjct 13806 AGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGT 13865 Query 1674 GGGCCCTGGATTGCAGAGGAAGATTGTTGGTATCCCGCCTTTAATTTGAACTGGCTTTCC 1733 || || |||||||| | ||||||||| |||||||| || || || | || ||| |||| Sbjct 13866 AGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCC 13925 Query 1734 GTACTT---CGTGTTTGATTGCCAGTCCCTTTGGGCCCCCATGAATTCCTTAAAGTGCTT 1790 ||| || | || | || ||| | |||||||||||||| || || ||||||||||| Sbjct 13926 GTATTTTACCTTGCTGGA---CCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTT 13982 Query 1791 TAGATAGTGCGGATCGACGTCATCAATGACGTTATACCATGACTCGTTGCTGTACACTTT 1850 |||||| ||||||||||||| |||||||| ||||||||| | | || || | ||| Sbjct 13983 TAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTT 14042 Query 1851 AGGACTCAGATCTAGGTGTCCACAAAGGTAATTATGCGGACCCAATGACCTGGCCCACAT 1910 | | ||| ||||| || || || ||||||||||| || || || || || |||||| Sbjct 14043 ATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTC 14102 Query 1911 CGTCTTCCCCGTCCGACTATCACCCTCAACGACAATGCTCACCGGTC-TCAGGGGCCGCG 1969 |||||||| || | | |||||||||| |||||| ||| |||| | | ||||||| Sbjct 14103 TGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCG 14162 Query 1970 CAGCGGCATCGACAACATTTTCTGCAGCCCA 2000 |||||||||| ||||||||| || ||||| Sbjct 14163 CAGCGGCATCCCTAACATTTTCAGCTGCCCA 14193 Score = 109 bits (120), Expect = 1e-20 Identities = 244/360 (68%), Gaps = 11/360 (3%) Strand=Plus/Plus Query 953 CATAGTGAGAATGCTTTGATGTTGTACATGGCATGCACCCATGCCTCCAATCCAGTGTAT 1012 |||| ||| ||||| ||| ||||| || | || ||||| || ||||| || ||| Sbjct 13084 CATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1013 GCAACTCTAAAGATACGAATCTATTTCTACGATTCGGTCACCAATTAATAAAGATTTAGT 1072 ||| | | | ||| | ||||| || || || | |||||||||| ||| | | Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 1073 TTTATTATCATTGAACTTT--GTACATATATTGTTTGCGTTAATACATTCCACAGTACAT 1130 |||||| |||| || || |||||| | ||||||| | |||||| | | ||||| Sbjct 13201 TTTATT-TCAT-GATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACAT 13258 Query 1131 GATTCACTGCCCTAATTACATTGTTTATGCTAATTACACCCAAACTATCTATAAATTTCA 1190 | || || ||||| | |||||| || ||||| ||||| || | |||| |||||||| Sbjct 13259 TGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCA 13318 Query 1191 AAACTTGGGTCCTAAATACCCTTAAGAAACGACCAATCT--GAAGGTGTGAGGTCGTCCA 1248 || | ||||||| ||||||||| || || | || | || | |||| Sbjct 13319 TTACACGAAATTTAAATACTCTTAAGAAA--ACGTATGTCGGAGGACGTAAACGAGTCCT 13376 Query 1249 GATGCGGAAGGTTAGGAAACATTGGTGAATCCCCAGTGCTTTCCTCAGGTTGTAGTTGAA 1308 ||| |||| | |||||| || ||||| |||| | ||||||||||||| |||||| Sbjct 13377 GATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAA 13436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8662481245144