Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_031306.1 Length=2749 Score E Sequences producing significant alignments: (Bits) Value seq19028 288 2e-74 >seq19028 Length=31091 Score = 288 bits (318), Expect = 2e-74 Identities = 1000/1547 (65%), Gaps = 110/1547 (7%) Strand=Plus/Plus Query 958 CATACTGAAAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTAT 1017 |||||||||||||| ||||||| |||| | |||||||| ||||||||||| ||| Sbjct 13084 CATACTGAAAATGCATTGTTGT---ATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1018 GCTACTTTGAAAGTCAGGAGTTATTTCTATGACTCAGTGACGAATTAATAAAGATTAAAT 1077 |||| ||| | | |||||||| ||||| || | |||||||||| ||| ||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 1078 TTTATTATATGTGAACTCTCTACAAATGTTGTTTGTGTCAATG-CATCCCATAATACATA 1136 |||||| ||| | |||| |||||| ||||| ||| ||||||||| Sbjct 13201 TTTATTTCATGATATTCAAGTACATCCACTGTTTGC-TCAATTACATTGAATAATACATT 13259 Query 1137 ATTCACTGCTCTAATTACATTATTCAAACTAATTACACCCAAATTATTAAGAAACTTCAA 1196 | || |||||||| | ||| || | |||||| ||||| || | | ||| |||| Sbjct 13260 GTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCAT 13319 Query 1197 AACTTGAGTCTTAAAGACCCTTAAGAAACGACCAGTCTGAGGCTGTGAATTCATCCAGAT 1256 || || ||||| || ||||||||| ||| |||| || || ||| ||| Sbjct 13320 TACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGAT 13379 Query 1257 TCGGTAGACTAGAAAACATTTGTGCACTCCCAGAGCTTTCCGCAGGTTGTAGTTGAACTG 1316 | || || ||| |||||| | ||| | |||| |||||||| |||||| | Sbjct 13380 CTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCG 13439 Query 1317 TATTTGTAACGTGATTATGTCTTCCTTCATCAGAAATGGACGGT-TGTG---GTGCTCTA 1372 ||||||| ||||||||| || ||| | | ||| || | ||| | | Sbjct 13440 AATTTGTATTTCGATTATGTCGGTTGTC----GAATTTGTTGGTCTGAGATTGTGGTTGA 13495 Query 1373 TTATCTTGAAATAAAGGGGATTTTGA-ATCTCCCAGATAT-------------------A 1412 ||||||||||| || | | || ||||| |||| | Sbjct 13496 GGATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGACTA 13555 Query 1413 CACGCCATTCTCTGCTTGAGCTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGATCGT 1472 ||||||||| ||||| ||||||||| ||||||||||||| |||||||| | Sbjct 13556 GACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGACCAG 13615 Query 1473 GACAGGCTAATGCTATGAAATAT-GAACATCCACAAGGGAGATCAACACGTCGACGCCTG 1531 |||| ||||| | | ||||| |||||||||||||| || || | |||| | ||| Sbjct 13616 AACAG-CTAATATTTTTGAATATTGAACATCCACAAGGCAGGTCTAGTCGTCTTCTTCTG 13674 Query 1532 TTC---CCCTTCTTGGCTAGCCTG---------------TGCTGCACTT----------- 1562 | | ||||||| || || | |||| ||| Sbjct 13675 ATTTGTCTCTTCTTGA-TATCCGGATATGTAAATGAGGTTGCTTTCCTTGTATAATGTCT 13733 Query 1563 -TG-----ATTGGAA--------CCTGA--GTAGAGTGGGCTTTCGATGGTGACGAAGAT 1606 || ||||| | |||| | | | ||| | ||||||| ||| Sbjct 13734 ATGCATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTGTAGAATTC 13793 Query 1607 CGCATTCTTTAAAGACCAATTTTTAAGTGCTCTATTTTTCTCTTCATCCAAGAATTCTTT 1666 ||||| | |||||||||||||| | | ||||||| || || || | ||| ||||| Sbjct 13794 TGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTT 13853 Query 1667 ATAGCTAGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAATACCTCCTTTAATTTG 1726 |||||| || | || || |||||||| | |||||| || || || || || || || | Sbjct 13854 ATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTT 13913 Query 1727 AACTGGCTTTCCGTACTTTGTATTTGATTG-CCAGTCTCTTTGGGCCCCCATGAATTCTT 1785 || ||| ||||||| ||| || | | | ||| | |||||||||||||| || |||| Sbjct 13914 TACAGGCCTTCCGTATTTTACCTT-GCTGGACCAATTGCTTTGGGCCCCCATAAACTCTT 13972 Query 1786 TAAAGTGTTTTAGATAGTGCGGATCTACGTCATCAATGACGTTGTACCAAGCATCATTGT 1845 ||||||| |||||||| |||||||| |||| |||||||| ||| ||||| |||| ||| Sbjct 13973 TAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTG 14032 Query 1846 TGTACACTCTAGGGCTTAGATCTAGATGCCCACACAAGTAATTATGTGGTCCCAGTGATC 1905 || | | || | | ||||| ||| || || | ||||||||||||||| | |||| Sbjct 14033 AATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATC 14092 Query 1906 GTGCCCACATCGTTTTTCCTGTTCTACTATCACCTTCAATTACTATACTTTTGGGTC-TC 1964 ||||||| || || ||||||||| ||||| ||||| || ||||| ||||||| | Sbjct 14093 TTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTT 14152 Query 1965 AACGGCCGCGCAGCGGCACTGACGACATTCTCGTCTGCCCATTCTTCAAGTTCTTCTGGA 2024 || ||||||||||||||| ||||| || ||||||| |||| Sbjct 14153 AATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA----------- 14201 Query 2025 ACTTGATCGAATGAAGAAGATGAAAAAGGAGAAATGTATTCCTCTATCGGAGGAGTAAAA 2084 ||| | ||| |||||| | ||||||| || || || || || | || Sbjct 14202 --TTG-TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAAT 14258 Query 2085 ATCCTATCTAAATTAGAATTTAAATTATGAAACTGTAATACAAAATCTTTAGGAGC-CTT 2143 || | |||||| || | | || ||||||| | || |||| ||| |||| || || Sbjct 14259 ATTCGATCTAATTTTGGAACTATATTATGATATTGAAATAGAAA--CTTTGCTGGCATTT 14316 Query 2144 CTCCTTTAATATATTGAGGGCCGCTGCTT---TGGACCCTGAATTGATTGCCTCGGCATA 2200 | || ||||| || || | |||| ||| | || | | | | || || ||| | Sbjct 14317 TTTCTCTAATA-ATAGAAAG-CGCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGA 14374 Query 2201 TGCGTCGTTGGCAGACTGGCAACCTCCTCTAGCTGATCTTCCATCGACTTGGAAAATTCC 2260 | | || || | | || ||||||||||||| |||| |||||||| ||| ||| | || Sbjct 14375 TACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCC 14434 Query 2261 ATGATCAAGGATGTCTCCGTCTTTCTCCATGTAGGTTTTGACATCGCTTGAGCTTTTAGC 2320 || | || | ||||||| | ||||| | || ||||| || |||||| Sbjct 14435 CCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGC 14494 Query 2321 TCCCTGAATGTTTGGATGGAAATGTGCTGACCTGCTTGGGGATG--TGAGGTCGAAGAAT 2378 || | |||||| ||| ||||| || | | | ||||| ||| |||||| | Sbjct 14495 GGATTGGAAGTTTGGGTGG-TATGTGGTG-CTAGTATTAGGATGGATGATATCGAAGTGT 14552 Query 2379 CTATTGTTTCTGCACTGGAACTTCCCTTCGAACTGGATGAGAACATG 2425 ||| |||||| | || ||| |||||||| || || || |||| Sbjct 14553 CTAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGGGCATG 14599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8684873183370