Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_031340.1 Length=2905 Score E Sequences producing significant alignments: (Bits) Value seq19028 136 7e-29 >seq19028 Length=31091 Score = 136 bits (150), Expect = 7e-29 Identities = 245/349 (70%), Gaps = 17/349 (5%) Strand=Plus/Plus Query 1816 TTCTCCTCATCCAGGAATTCTTTATAGGAGGAATTAGGACCAGGATTGCAAAGGAAGATT 1875 || ||||| || ||||| ||||||||| |||| |||||||||||||||| | ||||||| Sbjct 13831 TTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATT 13890 Query 1876 GAGGGCATTGT--CTTTTCCACGTGGATCGGCTTTCCGTATTTTG---TGTTGGATTGCC 1930 | || || | ||| | | | ||| ||||||||||| || |||| || Sbjct 13891 GTCGGTATCCCACCCTTT--ATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGA---CC 13945 Query 1931 AGCCCACCTGGGCCCCCATGAATTCTTTAAAATGTTTTAAATAATGTGGGTCTACATCAT 1990 | ||||||||||| || |||||||| || |||| |||||| || || || | || Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTAT 14005 Query 1991 CTATTATATTATAATCTGCAT--CTAAACTAAATACCTTATCGTTTAAATCTAAATGGCC 2048 | || || ||||| |||| | | ||||| |||| || ||||||||||| || Sbjct 14006 CAATGATGTTATACCAGGCATTATTTGAATAAAT--TTTATTATTCAAATCTAAATGACC 14063 Query 2049 ACTTAAATAATTATGTTTTCCTAGTGCCCTAGCCCATAATGTTTTTCCCGTCCTTGAATC 2108 | || ||||||||| ||||| | || ||||| ||| || || || || || || Sbjct 14064 GCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTC 14123 Query 2109 TCCCTCTAATACTAATGAT-TTAGGTC-TTAATGGCCCCGCAGGGGCAT 2155 ||||| ||| ||| | || |||| ||||||||| ||||| ||||| Sbjct 14124 ACCCTC-AATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCAT 14171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9180597457150