Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_031448.1 Length=2632 Score E Sequences producing significant alignments: (Bits) Value seq19028 178 2e-41 >seq19028 Length=31091 Score = 178 bits (196), Expect = 2e-41 Identities = 533/816 (65%), Gaps = 35/816 (4%) Strand=Plus/Plus Query 1530 TTTTCCTCTTTGTCGAGGAAACATTTATAACTAGATCCCTCACCAGGATTGCAAAGCACG 1589 |||||||| | ||||||| |||||| || || |||||||||||| | | | Sbjct 13831 TTTTCCTCCT---CGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1590 ATGCATGGGATACCTCCTTTAATTTGAACTGGCTTGCCGTATTTGCAATTTGATTG-CCA 1648 || || || || || || || | || ||| | |||||||| | ||| | | ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTGCTGGACCA 13946 Query 1649 GTCTTTTTGAGCGCCAATCAATTCTTTCCAATGCTTTAACTTTAGATAGTGGGGTGCTAT 1708 | |||| || || || || ||||| | ||||||| |||| || || | | Sbjct 13947 ATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTA------GATAATGCGGATCGAC 14000 Query 1709 GTCGTCAATGACGTTGTATTGCACATGGTTTGAATAGACCCGTGAATTGAAATCTAGGTG 1768 || ||||||| ||| || ||| |||||||| | ||| ||||||| || Sbjct 14001 GTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATG 14060 Query 1769 GCCGCTCAAATAATTGTGGACCCCCAATGCACGTGCCCACATCGTCTTCCCCGTTCTAGA 1828 |||| | ||||| || || || | | ||||||| |||||||| |||||||| Sbjct 14061 ACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGA 14120 Query 1829 ATCACCTTCGACGATGATACTGATAGGTCTTTCC-GGCCGCGCAGCGGCACCTCTCCCGA 1887 ||||| || | || ||||| | |||| || ||||||||||||||| |||| | Sbjct 14121 CTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCA----TCCCTA 14176 Query 1888 A-ATAATCATCTGCCCAGTCTTGCATCTCTCTCGGCACGTTAGTGAAAGAGGAGAGGTGA 1946 | || ||| |||||||| | ||| || |||| || || | Sbjct 14177 ACATTTTCAGCTGCCCAG----------CACTCAA----TTGTTGAAGGAAGAACAACTA 14222 Query 1947 AACGGAGGAGTCCATGGCTCCGGAGCCTTTGCA--AAAATTCTGTCCAAATTGCTAGAGA 2004 || ||| | | || || |||| ||| || |||| || || || | | Sbjct 14223 AAAGGACTAACATAAGGTTCAGGAGGGG--GCATGAATATTCGATCTAATTTTGGAACTA 14280 Query 2005 GGTTGTGATATTGGAAGAGAAACTTTTCTGGTAGTTTCTCTTTTATTATTGTCATGGCTT 2064 || |||||||| || ||||||||| |||| | ||| ||| | || || | | |||| Sbjct 14281 TATTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTT 14340 Query 2065 CTTCCTTTGAAGAAGCATTCAGTGCCTCCGATGCTGCATCATTAGTTGTCTGTTGACCTC 2124 |||| |||| | |||| | | || || | | | ||||||| ||||| ||| ||||| Sbjct 14341 CTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTC 14400 Query 2125 CTCTAGCAGATCTTCCGTCGATTTGAAAATGACCCCATTCGACGTAATCACCGTCTTTCT 2184 |||||||||||| ||| ||||||||||||| ||||| ||| |||||||| ||||||| Sbjct 14401 CTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCG 14460 Query 2185 CGATGTAGGACTTGACATCAGAGGATGACTTTGCACTCTGTATATTGGCATGGGAGACGG 2244 ||||||| ||| ||||| || ||||| || || || | || | ||| | || Sbjct 14461 CGATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGGTATGTGG 14520 Query 2245 AAGAGGTGTTTGGATGTATGAGGTCGAAGAATCTGCAATTCGTGCACTGGAACTTTCCTT 2304 || || ||||| |||| |||||| ||| || | | || ||| |||| Sbjct 14521 TGCTAGTATTAGGATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCTTGCCTT 14580 Query 2305 GGAATTGAATGAGAGCATGCAAATGCGGTTCCCCAT 2340 ||||||||| || ||||| ||| |||||||| Sbjct 14581 CGAATTGAATAAGGGCATGGCTATGAAATTCCCCAT 14616 Score = 131 bits (144), Expect = 3e-27 Identities = 259/378 (69%), Gaps = 18/378 (5%) Strand=Plus/Plus Query 849 GAATCATACTGAGAACGCATTATTATTGTATATGGCATGTACTCATGCCTCTAATCCTGT 908 || ||||||||| || ||||| || |||||| | |||||||| ||||||||||| Sbjct 13080 GACTCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 909 GTATGCTACTTTGAAAATTCGGATCTATTTTTATGATTCGATATCCAATTAATAAAATTT 968 ||| |||| ||| || || | ||||||||||| |||| |||||||||| || Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 969 GTATTTTATTTCATGATTTTCAAGTACAT--AATTT----ACATATGGTTTGTCTGTTGC 1022 | ||||||||||||||| ||||||||||| | | | || | ||| | | | Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATAC 13256 Query 1023 GAAACGAACAGCTCTGATTACATTGTTAAGAGAAATAACTCCTAAACGGTCT--ATATAC 1080 |||||||| || | |||||||| | |||||| ||||| |||||| | || Sbjct 13257 ATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTT 13316 Query 1081 AATAAAACTAAATACTTGAATCTACTTAA-ATAAGTCATCCCAGAAGCTTGAATCGATGT 1139 || | || |||| || ||| ||||| | || || | || | || ||| Sbjct 13317 CATTACACGAAAT--TTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGA--- 13371 Query 1140 CGTCCAGACTTGGAAATTGAGATATGCCTTGTGAAGATCCAGTCTGTTCCTGAGGTTGTG 1199 |||| || | ||| ||||| | || |||||||||| |||| ||||| |||||||| Sbjct 13372 -GTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTG 13430 Query 1200 GTTGAACCTTATCTGTAT 1217 |||||| | || ||||| Sbjct 13431 GTTGAATCGAATTTGTAT 13448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8310607930164