Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_031455.1 Length=2654 Score E Sequences producing significant alignments: (Bits) Value seq19028 118 2e-23 >seq19028 Length=31091 Score = 118 bits (130), Expect = 2e-23 Identities = 243/356 (68%), Gaps = 14/356 (4%) Strand=Plus/Plus Query 1543 TTTTCCTCTTTGTCCAGGAAGTCTTTATAACTGGCCCCCTCTCCAGGATTGCAGAGCACG 1602 |||||||| | | ||||| |||||||| |||| ||||||||||| | | | Sbjct 13831 TTTTCCTCCTCG---AGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1603 ATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTTCCGTATTTGCAATTTGACTG--CC 1660 |||| || ||||| || || || | || ||| |||||||||| | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTT-TACCTTG-CTGGACC 13945 Query 1661 AGTCTCTTTGGGACCCGAGGAGCTCTTTCCAGTGCTTTAGCTTTAGGTAGTGCGGAGGGA 1720 | | ||||||| ||| | | |||||| ||| ||||||| || |||||| || Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGT------GCTTTAGATAATGCGGATCGA 13999 Query 1721 CGTCATCAATGACGTTATACTCAGCCTCGTTGGAAAAGACCCTGGAATTGAAATCCAGGT 1780 ||| |||||||| ||||||| || | || ||| | | | ||| ||||| | | Sbjct 14000 CGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAAT 14059 Query 1781 GTCCACTGAGATAATTGTGGGACCCTAAAGCACGTGCCCACATCGTCTTCCCCGTTCGAC 1840 | || | || ||||| || | ||||||| | ||||||| |||||||| |||| | Sbjct 14060 GACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAG 14119 Query 1841 TGTCACCTTCGACGATGATACTAACAGG-CCTGACAGGCCGCGCAGCGGCATCTCT 1895 ||||| || | || ||||| || | | | ||||||||||||||||| || Sbjct 14120 ACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCT 14175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8380982593160