Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_031456.1 Length=2692 Score E Sequences producing significant alignments: (Bits) Value seq19028 113 8e-22 >seq19028 Length=31091 Score = 113 bits (124), Expect = 8e-22 Identities = 240/354 (68%), Gaps = 17/354 (5%) Strand=Plus/Plus Query 1597 TTTTCCTCTTTGTCGAGGAAATCTTTATAGCTGGCCCCCTCTCCAGGATTGCAAAGCACG 1656 |||||||| | ||||||| ||||||||||||| ||||||||||| | | | Sbjct 13831 TTTTCCTCCT---CGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1657 ATTGAAGGAATTCCGCCTTTAATTTGAACAGGCTTTCCGTACTTACAGTTGGACTG--CC 1714 |||| || || || || || || | |||||| ||||||| || ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTG--CTGGACC 13945 Query 1715 AGTCTTTTTGAGCACCTATCAATTCCTTCCAGTGCTTTAACTTTAGATATTGCGGACTGA 1774 | | |||| || || || || || || |||| ||||||||| |||||| || Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTG------CTTTAGATAATGCGGATCGA 13999 Query 1775 CATCATCGATGATGACGTTATACTCCACTTCGTTGGAGTAAACACGAGAATTGAAGTCCA 1834 | | ||| ||||| ||||||| | | || || |||| | ||| || || | Sbjct 14000 CGTTATCAATGAT---GTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTA 14056 Query 1835 GGTGTCCACTGAGATAATTATGTAGGCCCAAAGCACGAGCCCACATTGTTTTACCTGTTC 1894 || || | || ||||||||| | || |||| | |||||| ||| || ||||||| Sbjct 14057 AATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTC 14116 Query 1895 GAGAATCACCTTCTATGATAATACTGACAGG-CCTACAAGGCCGCGCAGCGGCA 1947 ||| ||||| || |||| |||||| || | | | ||||||||||||||| Sbjct 14117 TAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCA 14170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8502538829244