Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_031458.1 Length=2609 Score E Sequences producing significant alignments: (Bits) Value seq19028 150 3e-33 >seq19028 Length=31091 Score = 150 bits (166), Expect = 3e-33 Identities = 542/825 (66%), Gaps = 47/825 (6%) Strand=Plus/Plus Query 1507 TTTTCCTCTTTGTTCAGGAAATCTTTATAGCTGGCACCCTCACCAGGATTGCAAAGCACG 1566 |||||||| | | ||||| ||||||||||||| | |||||||||||| | | | Sbjct 13831 TTTTCCTCCTCG---AGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1567 ATTGATGGGATTCCCCCTTTAATTTGAACTGGCTTTCCGTATTTGCAATTTGACTG--CC 1624 |||| || || || || || || | || ||| |||||||||| | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACC 13945 Query 1625 AGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTTTAGATATTGCGGTGCGA 1684 | | | |||||||||| || ||||| |||||||||| ||| ||||| ||| Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAG------ATAATGCGGATCGA 13999 Query 1685 CGTCATCAATGACGTTATACTCCACTTCGTTCGAATAGACTCTTGGGTTGAAGTCTAGAT 1744 ||| |||||||| ||||||| | | || ||||| | | | || || |||| || Sbjct 14000 CGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAAT 14059 Query 1745 GTCCACTAAGGTAATTATGTGGGCCTAGGGCACGAGCCCACATCGTCTTCCCTGTCCTCG 1804 | || | |||||||||||||| |||| | | |||||| ||||||||||| || | Sbjct 14060 GACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAG 14119 Query 1805 AGTCACCTTCTACTATGATACTCACTGGTC-TCTCCGGCCGCGCAGCGGAACTCCTTCCA 1863 | ||||| || | | |||||| |||| | ||||||||||||| | ||| | | Sbjct 14120 ACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCA-TCC--CTA 14176 Query 1864 AAATATTCGTCCGCCCATGCTTGCATCTCGTCTGGAACTCTAGTGAACGAGGAGAGTTGA 1923 | || ||| | ||||| ||| ||| || | | |||| || || | Sbjct 14177 ACATTTTCAGCTGCCCA-----GCA-CTC------AATTGT--TGAAGGAAGAACAACTA 14222 Query 1924 AACGGAGGAACCCATTGTTCCGGAGCCTTAGCGAATATTTTCTCT-AGGTTGGAGCGTAT 1982 || ||| ||| | |||| |||| ||||||| ||| | ||||| | ||| Sbjct 14223 AAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAAC-TAT 14281 Query 1983 GTTATGGTTTTGCAGCACAAAGTCCTTTGGCTGC--TCCTCCTTTAA-AACCGCCATGGC 2039 ||||| | ||| | | ||| ||||| || | | || ||| || | | || Sbjct 14282 ATTATGATATTGAAATAGAAA---CTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGC 14338 Query 2040 AGCTTGAACAGATCCAGCATTCAACGCCTTGGCATATGAATCGTTAGCCGATTGTTGACC 2099 ||| || ||| |||| | ||||| | ||| || ||| || | | ||| ||| Sbjct 14339 TTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACC 14398 Query 2100 TCCTCTAGCAGATCTGCCGTCGATTTGGAATTCTCCCCAGTCAACTGT-ATCTCCGTCCT 2158 |||||||||||||| || |||||||| || | |||||||| ||| ||| | ||| | Sbjct 14399 TCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTC-GGTGTAATCACAGTCTT 14457 Query 2159 TCTCGATGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGTATGTTCGGATGGAAAT 2218 || ||||||| ||| || || || |||||||| || | ||| || ||| || Sbjct 14458 TCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TAT 14516 Query 2219 GTGTTGACCTGGT-TGGGGA--GACCAAATCGAAGAATCTGTAATTCGTGCACTGGTACT 2275 ||| || || || | ||| || | ||||||| ||| || | | || || Sbjct 14517 GTGGTG--CTAGTATTAGGATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCT 14574 Query 2276 TGCCTTCGAATTGGATGAGAACGTGGAGATGAGGCTCCCCATTCT 2320 ||||||||||||| || || | ||| |||| ||||||| || Sbjct 14575 TGCCTTCGAATTGAATAAGGGCATGGCTATGAAATTCCCCATCCT 14619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8237034418850