Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_031754.1 Length=2738 Score E Sequences producing significant alignments: (Bits) Value seq19028 215 9e-53 >seq19028 Length=31091 Score = 215 bits (238), Expect = 9e-53 Identities = 261/348 (75%), Gaps = 7/348 (2%) Strand=Plus/Plus Query 1628 TTCTTTTCCTCGTCCAAGAATTCTTTATAGCTTGCGTTGGGCCCTGGATTGCAGAGGAAG 1687 || |||||||| || | ||| ||||||||||| | | || || |||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1688 ATTGTTGGTATGCCGCCTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTTGATTG-CCA 1746 ||||| ||||| || || || || | || ||| | ||||| ||| || | | | ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTT-GCTGGACCA 13946 Query 1747 GTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTGAGGAAGTGCGGATCGACGTCATC 1806 | |||||||||||||| || |||||||||||||| || | ||||||||||||| ||| Sbjct 13947 ATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATC 14006 Query 1807 AATGACGTTATACCATGCGTCGTTACTGTAT-ACTTTTGGGCTT-AGATCTAAATGCCCA 1864 ||||| ||||||||| || | || || || | |||| || | ||||||||| || Sbjct 14007 AATGATGTTATACCAGGCATTATT--TGAATAAATTTTATTATTCAAATCTAAATGACCG 14064 Query 1865 CATAAATAGTTATGTGGACCTATAGACCTAGCCCACATTGTTTTCCCGGTACGACTATCT 1924 |||| || |||||||| |||| ||| || |||||| ||| ||||| || | | || Sbjct 14065 CATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCA 14124 Query 1925 CCCTCAATTACTATACTTTGAGGTC-TCAGTGGCCGCGCAGCGGCGTC 1971 |||||||| || ||||| | |||| | | ||||||||||||||| || Sbjct 14125 CCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATC 14172 Score = 113 bits (124), Expect = 8e-22 Identities = 288/438 (66%), Gaps = 9/438 (2%) Strand=Plus/Plus Query 938 TCACACTGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAACCCTGTGTA 997 ||| ||||| ||||| |||| ||||||| | |||||||| ||||| ||||| || Sbjct 13083 TCATACTGAAAATGCATTGT---TGTATATTAGTTCAACTCATGCATCTAATCCTGTATA 13139 Query 998 TGCTACTTTGAAAGTTAGGAGTTACTTCTACGATTCTGTAACGAATTAATATTAATAAAG 1057 | |||| ||| | | ||||| || || || |||| | | ||||||||| Sbjct 13140 TTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTA------TCAAATTAATAAAT 13193 Query 1058 ATCGAATTTTATATCTGAATATTGATCCACATACATTGTTTGTTGAATTACATTGTACAA 1117 || ||||||||| || ||||| | |||| || |||||| | |||||||||| | || Sbjct 13194 ATTGAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAA 13253 Query 1118 TACGTGTTCTACAGCCTTAATTACTAAATTAATTGAGATTACACCTAGATTGTTGAGATA 1177 ||| | |||||||| |||| | ||||| || ||||||| || | | | Sbjct 13254 TACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAA 13313 Query 1178 CTTGAGGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAGTCTGAGGGTGTAAGGTCGT 1237 || | || | ||| ||||| |||||||||| ||| |||| |||| || Sbjct 13314 TTTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGT 13373 Query 1238 CCAGACCCGGAAGGTTAGAAAACACTTGTGCACTCCCAGAGCTCTCCGAAGGTTGTAGTT 1297 || || | |||| | || ||| ||||| | ||| | ||| ||||||| ||| Sbjct 13374 CCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTT 13433 Query 1298 GAATTGGATCCTCATTGTTATTATGTCCATGTTCGTCGTGAATGGACGGTTGTCGTGGCT 1357 |||| | || ||| |||||||| | ||| | ||| | | | |||| | Sbjct 13434 GAATCGAATTTGTATTTCGATTATGTCGGTTGTCGAATTTGTTGGTCTGAGATTGTGGTT 13493 Query 1358 GAGGATCTTGAAATAAAG 1375 ||||||||||||||| || Sbjct 13494 GAGGATCTTGAAATATAG 13511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8649685851872