Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30]
33,873 sequences; 833,080,760 total letters
Query= NC_031760.1
Length=2753
Score E
Sequences producing significant alignments: (Bits) Value
seq19028 223 6e-55
>seq19028
Length=31091
Score = 223 bits (246), Expect = 6e-55
Identities = 291/394 (74%), Gaps = 9/394 (2%)
Strand=Plus/Plus
Query 1610 GCATTCTTTAAAGCCCAATTTTTTAGTGCAGAATTCTTCTCTTCATCCAAAAACTCTTTA 1669
||||| | |||| ||||||||||| | | ||| || || || || | |||||||||
Sbjct 13795 GCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTA 13854
Query 1670 TAGCTTGAATTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGA 1729
||||| ||| | || || |||||||| | |||||| || || || || || || || |
Sbjct 13855 TAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTT 13914
Query 1730 ACTGGCTTCCCGTATTTTGTATTTGATTG-CCAGTCCTTTTGGGCCCCCATGAACTCTTT 1788
|| ||| | ||||||||| ||| | | ||| | ||||||||||||| ||||||||
Sbjct 13915 ACAGGCCTTCCGTATTTT-ACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTT 13973
Query 1789 AAAGTGCTTTAGGTAATGCGGGGTCGA-GTCATCAATGACGTTAAACCAGGCGTCGTTAC 1847
|||||||||||| |||||| || |||| || |||||||| |||| ||||||| | ||
Sbjct 13974 AAAGTGCTTTAGATAATGC-GGATCGACGTTATCAATGATGTTATACCAGGCATTATT-- 14030
Query 1848 TGTATACCCTT--GGGCTCAGATCTAGATGTCCACACAGATAATTATGTGGACCTAATGA 1905
|| ||| || ||| ||||| ||| || || || ||||||||||| ||||| ||
Sbjct 14031 TGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGA 14090
Query 1906 TCTGGCCCACATCGTCTTCCCCGTACGACTATCTCCTTCAATCACTATACTTTGAGGTC- 1964
||| |||||| |||||||| || | | || || ||||| || ||||| | ||||
Sbjct 14091 TCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCG 14150
Query 1965 TGTGTGGCCGCGCAGCGGCATCGACAACGTTTTC 1998
| |||||||||||||||||| ||| |||||
Sbjct 14151 TTAATGGCCGCGCAGCGGCATCCCTAACATTTTC 14184
Score = 104 bits (114), Expect = 4e-19
Identities = 246/367 (67%), Gaps = 11/367 (3%)
Strand=Plus/Plus
Query 950 GAATCATACGGAAAATGCGTTAATGCTTATATGGCTTGTACTCACGCTAGCAAACCCTGT 1009
|| |||||| |||||||| || || ||||| || ||||| || | | || |||||
Sbjct 13080 GACTCATACTGAAAATGCATTGTTG--TATATTAGTTCAACTCATGC-ATCTAATCCTGT 13136
Query 1010 TTATGCTACGTTGAAGATTAGGATATATTTTTATGACTCTGTAACGAATTGATATTAATG 1069
||| ||| ||| | | | ||||||||||| |||| | |||| |||
Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATA------ 13190
Query 1070 AATTTTGAATTTTATTTCTGAATATTGATCTACATACATAGTTTGTTGGATTACATTGTA 1129
||| |||||||||||||| ||||| | ||||| || ||||| | ||||||||| |
Sbjct 13191 AATATTGAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAA 13250
Query 1130 CAATACATGTTCTACAGCTTTAATAACTAAATTAATTGAAATTACACCGAGATTGTTC-A 1188
||||||| ||||||||| |||||| ||||| ||| ||||| | || | || |
Sbjct 13251 TAATACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTA-ATCGGTCTA 13309
Query 1189 GATATTTGAGGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAGTCTGAGGCTGTAAGG 1248
| |||| | || | ||| ||||| |||||||||| ||| |||| ||||
Sbjct 13310 AAAATTTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAAC 13369
Query 1249 TCGTCCAGATTCGGAATGTTAGAAAACACTTGTGCAGTCCCAGAGCTTTCCGAGTGTTGT 1308
|||| ||| ||| | || ||| ||||| || ||| | |||| |||||
Sbjct 13370 GAGTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGT 13429
Query 1309 AGTTGAA 1315
||||||
Sbjct 13430 GGTTGAA 13436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 8697668576642
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |