Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_031760.1 Length=2753 Score E Sequences producing significant alignments: (Bits) Value seq19028 223 6e-55 >seq19028 Length=31091 Score = 223 bits (246), Expect = 6e-55 Identities = 291/394 (74%), Gaps = 9/394 (2%) Strand=Plus/Plus Query 1610 GCATTCTTTAAAGCCCAATTTTTTAGTGCAGAATTCTTCTCTTCATCCAAAAACTCTTTA 1669 ||||| | |||| ||||||||||| | | ||| || || || || | ||||||||| Sbjct 13795 GCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTA 13854 Query 1670 TAGCTTGAATTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGA 1729 ||||| ||| | || || |||||||| | |||||| || || || || || || || | Sbjct 13855 TAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTT 13914 Query 1730 ACTGGCTTCCCGTATTTTGTATTTGATTG-CCAGTCCTTTTGGGCCCCCATGAACTCTTT 1788 || ||| | ||||||||| ||| | | ||| | ||||||||||||| |||||||| Sbjct 13915 ACAGGCCTTCCGTATTTT-ACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTT 13973 Query 1789 AAAGTGCTTTAGGTAATGCGGGGTCGA-GTCATCAATGACGTTAAACCAGGCGTCGTTAC 1847 |||||||||||| |||||| || |||| || |||||||| |||| ||||||| | || Sbjct 13974 AAAGTGCTTTAGATAATGC-GGATCGACGTTATCAATGATGTTATACCAGGCATTATT-- 14030 Query 1848 TGTATACCCTT--GGGCTCAGATCTAGATGTCCACACAGATAATTATGTGGACCTAATGA 1905 || ||| || ||| ||||| ||| || || || ||||||||||| ||||| || Sbjct 14031 TGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGA 14090 Query 1906 TCTGGCCCACATCGTCTTCCCCGTACGACTATCTCCTTCAATCACTATACTTTGAGGTC- 1964 ||| |||||| |||||||| || | | || || ||||| || ||||| | |||| Sbjct 14091 TCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCG 14150 Query 1965 TGTGTGGCCGCGCAGCGGCATCGACAACGTTTTC 1998 | |||||||||||||||||| ||| ||||| Sbjct 14151 TTAATGGCCGCGCAGCGGCATCCCTAACATTTTC 14184 Score = 104 bits (114), Expect = 4e-19 Identities = 246/367 (67%), Gaps = 11/367 (3%) Strand=Plus/Plus Query 950 GAATCATACGGAAAATGCGTTAATGCTTATATGGCTTGTACTCACGCTAGCAAACCCTGT 1009 || |||||| |||||||| || || ||||| || ||||| || | | || ||||| Sbjct 13080 GACTCATACTGAAAATGCATTGTTG--TATATTAGTTCAACTCATGC-ATCTAATCCTGT 13136 Query 1010 TTATGCTACGTTGAAGATTAGGATATATTTTTATGACTCTGTAACGAATTGATATTAATG 1069 ||| ||| ||| | | | ||||||||||| |||| | |||| ||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATA------ 13190 Query 1070 AATTTTGAATTTTATTTCTGAATATTGATCTACATACATAGTTTGTTGGATTACATTGTA 1129 ||| |||||||||||||| ||||| | ||||| || ||||| | ||||||||| | Sbjct 13191 AATATTGAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAA 13250 Query 1130 CAATACATGTTCTACAGCTTTAATAACTAAATTAATTGAAATTACACCGAGATTGTTC-A 1188 ||||||| ||||||||| |||||| ||||| ||| ||||| | || | || | Sbjct 13251 TAATACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTA-ATCGGTCTA 13309 Query 1189 GATATTTGAGGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAGTCTGAGGCTGTAAGG 1248 | |||| | || | ||| ||||| |||||||||| ||| |||| |||| Sbjct 13310 AAAATTTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAAC 13369 Query 1249 TCGTCCAGATTCGGAATGTTAGAAAACACTTGTGCAGTCCCAGAGCTTTCCGAGTGTTGT 1308 |||| ||| ||| | || ||| ||||| || ||| | |||| ||||| Sbjct 13370 GAGTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGT 13429 Query 1309 AGTTGAA 1315 |||||| Sbjct 13430 GGTTGAA 13436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8697668576642